Published January 29, 2026
| Version 1.0.0
Dataset
Open
ImmunAID-ms-parameters
Authors/Creators
- 1. GIGA-institute, CHU Liege, University of Liege
-
2.
University of Liège
- 3. University of Liège - GIGA institute - GIGA proteomics
Description
# ImmunAID-ms-parameters
Normalization parameters used to generate the proteomics data for the paper:
**Adult patients with autoinflammation of unknown origin partially phenocopy the immune presentation of Still’s disease**
## Content of FragPipe parameters folder
- The `fragger.params` file defines all database search settings (e.g. enzyme specificity, mass tolerances, allowed missed cleavages, and fixed/variable modifications), ensuring the MS/MS search is fully reproducible and its search space is clearly documented.
- The `sdrf.tsv` file follows the Sample and Data Relationship Format and describes the experimental design and sample metadata for each LC-MS/MS run (such as biological conditions, replicates, and raw file paths), enabling correct sample grouping, downstream statistical analysis, and transparent linkage between raw data and biological context.
## How to cite:
If you use these parameters, please cite it as follows:
Poulet, C., & Baiwir, D. (2026). ImmunAID-ms-parameters (Version 1.0.0) [Dataset]. University of Liège - GIGA Institute. Zenodo. https://doi.org/10.5281/zenodo.18413673
License: CC BY-NC-ND 4.0
Repository: https://gitlab.uliege.be/giga-rheumatology/public/immunaid-ms-parameters
Files
Files
(12.4 kB)
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md5:61972aee42e5f6fedfda9fe3f93eeb1c
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Additional details
Related works
- Is identical to
- Dataset: https://gitlab.uliege.be/giga-rheumatology/public/immunaid-ms-parameters (URL)