Open repository for EU-funded research outputs from Horizon Europe, Euratom, and earlier Framework Programmes.
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September 30, 2026 (v1)PosterOpen
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September 30, 2026 (v5.1.2)SoftwareOpen
reorder grants by end year and add an ordering note; stack Department Chair dates; Code4Lib to accepted and at press; PDG dates in Major Projects; reorder PhD and committee lists
Uploaded on September 30, 2026
Part of Daniel Paul O'Donnell Personal Repository
32 more versions exist for this record
998215 -
September 30, 2026 (v1.5.0)SoftwareOpen
Add the missing deeptools_plot rule to generate the final plotHeatmap/plotProfile TSS and metagene PDFs from the deeptools_mat matrices, and wire these (plus the upstream deeptools_prep/deeptools_mat outputs) into rule all so dryrun/run actually schedule them; previously nothing requested these outputs so Snakemake silently never ran deepTools...
Uploaded on September 30, 2026
Part of CCR Collaborative Bioinformatics Resource [CCBR]
10 more versions exist for this record
653242 -
September 30, 2026 (Glimpse2SVImputation_prerelease_v1.0.4)SoftwareOpen
Pipeline for cell type label transfer using SCVI and SCANVI models. Integrates single-cell RNA (GEX) and (optionally) ATAC data with an annotated reference to transfer cell type labels via semi-supervised deep generative models. When no ATAC h5ad is provided, the pipeline auto-detects GEX-only mode and trains/annotates from the reference atlas...
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September 30, 2026 (Glimpse2SVImputation_prerelease_v1.0.4)SoftwareOpen
WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...
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September 30, 2026 (Glimpse2SVImputation_prerelease_v1.0.4)SoftwareOpen
Warp Analysis Research Pipelines The Warp Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia...
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September 30, 2026 (Glimpse2SVImputation_prerelease_v1.0.4)SoftwareOpen
Warp Analysis Research Pipelines The Warp Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia...
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September 30, 2026 (Glimpse2SVImputation_prerelease_v1.0.4)SoftwareOpen
WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...
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September 30, 2026 (Glimpse2SVImputation_prerelease_v1.0.4)SoftwareOpen
Warp Analysis Research Pipelines The Warp Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia...
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September 30, 2026 (Glimpse2SVImputation_prerelease_v1.0.4)SoftwareOpen
WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...
