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April 4, 2025 (v1)DatasetOpen
Table 2. Summary of data sets used for phylogenetic inferences. PropertiesTEF-1αTEF-1αLSURPB2RPB2Introns1 st & 2 nd3 rd1 st & 2 nd3 rdAlignment size592296995524262292Excluded characters——167———Model selectedGTR+I+GGTR+GGTR+I+GHKY+I+GGTR+I+GGTR+I+G-Likelihood score Base frequencies3.250.91566.952.549158.480.47922.536.92455.748.05757.160.884Freq....
Uploaded on August 18, 2025
Part of Biodiversity Literature Repository
Published in Persoonia, 54(1), 17, 2025.
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April 4, 2025 (v1)DatasetOpen
.) Continued (. 1 Table (2014)ReferencesThis studyThis studyThis studyThis studyThis studyThis studyThis studyGafforov et al.GenBank Accession No. LSU RPB 2 TEF- 1 α PP 851654 PP 854051 —PP 851655 PP 854052 —PP 851656 PP 854053 —PP 851657 PP 854054 —PP 851658 PP 854055 PP 853860PP 851659 PP 854056 PP 853861PP 851660 PP 854057 PP 853862KM 264325...
Uploaded on August 18, 2025
Part of Biodiversity Literature Repository
Published in Persoonia, 54(1), 15, 2025.
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April 4, 2025 (v1)DatasetOpen
Table 1. GenBank accession numbers of sequences used in this study. (Genera) / SpeciesCountryCollection referenceSubstrate / hostGenBank Accession No.ReferencesLSURPB2TEF-1αFlaviporellusF. splitgerberiFrench GuianaJV 1908/6Hardwoods of many kindsMZ437386——Wu et al. (2022)FomitiporellaF. caryophylliIndonesiaMUCL 43120 / FRI-359-CShorea robusta...
Uploaded on August 18, 2025
Part of Biodiversity Literature Repository
Published in Persoonia, 54(1), 4-14, 2025.
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August 18, 2025 (v0.1.5)SoftwareOpen
Changes in this version: Fixed sed command compatibility with macOS Resolved issue where sed replacement failed on macOS systems
Uploaded on August 18, 2025
Part of Navarrabiomed Datasets de la Universidad Pública de Navarra
2 more versions exist for this record
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August 18, 2025 (MultiSampleSmartSeq2SingleNucleus_v2.2.2)SoftwareOpen
Warp Analysis Research Pipelines The Warp Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia...
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August 18, 2025 (MultiSampleSmartSeq2SingleNucleus_v2.2.2)SoftwareOpen
WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...
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August 18, 2025 (MultiSampleSmartSeq2SingleNucleus_v2.2.2)SoftwareOpen
WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...
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August 18, 2025 (MultiSampleSmartSeq2SingleNucleus_v2.2.2)SoftwareOpen
WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...
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August 18, 2025 (v7)DatasetOpen
The Encyclopedia of Life (EOL, eol.org) aggregates biodiversity information from more than 400 sources and provides access to the data through taxon pages, visual query and application programming interfaces. Scientific names are essential elements of the data integration infrastructure, but their shortcomings as key identifiers are well...
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August 18, 2025 (MultiSampleSmartSeq2SingleNucleus_v2.2.2)SoftwareOpen
WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...
