starschema/COVID-19-data: Autorelease 2021-02-24

Földi Tamás; Chris von Csefalvay; piglerp; williamwash; peterpigler; Atsidir; william-wash; zemplenib; João Rodrigues; Mór Kapronczay; Szilárd Huber; grglyb; suommynona

Features CDC Reported Patiet Impact #318 (chrisvoncsefalvay) Commits [d9238e7]: add papermill output tag (Földi Tamás) #318 [ffc5882]: manual syntax fix (Földi Tamás) #318 [d035cea]: Merge branch 'master' of https://github.com/starschema/COVID-19-data into cdc-reported-patient-impact (piglerp)...

35 more version(s) exist for this record

A large-scale COVID-19 Twitter chatter dataset for open scientific research - an international collaboration

Banda, Juan M.; Tekumalla, Ramya; Wang, Guanyu; Yu, Jingyuan; Liu, Tuo; Ding, Yuning; Artemova, Katya; Tutubalina, Elena; Chowell, Gerardo

Version 50 of the dataset.  Due to the relevance of the COVID-19 global pandemic, we are releasing our dataset of tweets acquired from the Twitter Stream related to COVID-19 chatter. Since our first release we have received additional data from our new collaborators, allowing this resource to...

50 more version(s) exist for this record

BIP4COVID19: Impact metrics and indicators for coronavirus related publications

Thanasis Vergoulis; Ilias Kanellos; Serafeim Chatzopoulos; Danae Pla Karidi; Theodore Dalamagas

This dataset contains impact metrics and indicators for a set of publications that are related to the COVID-19 infectious disease and the coronavirus that causes it. It is based on: Τhe CORD-19 dataset released by the team of Semantic Scholar1 and Τhe curated data provided by the LitCovid hub2....

42 more version(s) exist for this record

goldsteinepi/covid_hiv: An application of a difference-based measure to identify ecological disparities in the co-occurrence of COVID-19 and HIV infection in Philadelphia, Pennsylvania.

Neal D. Goldstein

Goldstein ND, Webster JL, Welles SL. An application of a difference-based measure to identify ecological disparities in the co-occurrence of COVID-19 and HIV infection in Philadelphia, Pennsylvania. Manuscript in preparation.

2 more version(s) exist for this record

Flowminder/FlowKit: 1.15.0

Jonathan Gray; maxalbert; James Harrison; Bhavin Panchal; Dan Williams; OwlHute; Guilherme Zagatti; flowstef; Christopher J Brooks; The Gitter Badger

Added FlowETL flux check can be turned off by setting use_flux_sensor=False in create_dag. #3603 Changed The use_file_flux_sensor argument to create_dag is deprecated. To use the table-based flux check in a file-based DAG, set use_flux_sensor='table'. Improvements to token display in FlowAuth. #2812

28 more version(s) exist for this record

ocelhay/como: v17.1.1

Olivier; Bo Gao; SaiTheinThanTun; ricardoaguas

bug with report when cumulative_death are all "NA" fix crash when vaccination efficacy is 100 cap interventions to startdate

30 more version(s) exist for this record

dfm/python-fsps: python-fsps v0.3.0rc1

Ben Johnson; Dan Foreman-Mackey; Jonathan Sick; Joel Leja; Nell Byler; Mike Walmsley; Erik Tollerud; Henry Leung; Spencer Scott

A release candidate for v0.3

1 more version(s) exist for this record

Evolutionary dynamics of transposable elements in bdelloid rotifers (figure 2 - source data)

Nowell, Reuben; Wilson, Christopher; Almeida, Pedro; Schiffer, Philipp; Fontaneto, Diego; Becks, Lutz; Rodriguez, Fernando; Arkhipova, Irina; Barraclough, Timothy

Transposable elements (TEs) are selfish genomic parasites whose ability to spread autonomously is facilitated by sexual reproduction in their hosts. If hosts become obligately asexual, TE frequencies and dynamics are predicted to change dramatically, but the long-term outcome is unclear. Here,...

Generalized SEIR Epidemic Model (fitting and computation)

E. Cheynet

Updated examples + the function getMultipleWaves, which is now more robust but also can significantly increase the computational time.

12 more version(s) exist for this record

CORD-19 Diachronic Concept Embeddings

Newman-Griffis, Denis; Sivaraman, Venkatesh; Fosler-Lussier, Eric; Perer, Adam; Hochheiser, Harry

Medical concept embeddings trained on monthly releases of the CORD-19 dataset, for analysis of diachronic change. This resource includes: Concept embeddings, trained using the JET toolkit on the set of articles added to CORD-19 in each month of March 2020 - October 2020.  Concepts are SNOMED CT...

2 more version(s) exist for this record