Open repository for EU-funded research outputs from Horizon Europe, Euratom, and earlier Framework Programmes.
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October 17, 2026 (v1.6.5)SoftwareOpen
Yet Another Rapid Readout (Yarr) software package contains calibration and data taking applications to operate and perform data acquisition on ATLAS Inner Tracker (ITk) Pixel and Strip modules. This framework supports characterization, quality control measurements, system testing and test beam operations. The framework provides an abstraction...
Uploaded on October 17, 2026
Part of The ATLAS Experiment at CERN
5 more versions exist for this record
599113 -
October 16, 2026 (v0.3)SoftwareOpen
This workflow performs retrieval of SRA metadata tables and FASTQ sequence files from input BioProject IDs.
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October 16, 2026 (Optimus_v9.3.0)SoftwareOpen
Pipeline for cell type label transfer using SCVI and SCANVI models. Integrates single-cell RNA (GEX) and (optionally) ATAC data with an annotated reference to transfer cell type labels via semi-supervised deep generative models. When no ATAC h5ad is provided, the pipeline auto-detects GEX-only mode and trains/annotates from the reference atlas...
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October 16, 2026 (Optimus_v9.3.0)SoftwareOpen
WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...
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October 16, 2026 (Optimus_v9.3.0)SoftwareOpen
Warp Analysis Research Pipelines The Warp Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia...
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October 16, 2026 (Optimus_v9.3.0)SoftwareOpen
Warp Analysis Research Pipelines The Warp Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia...
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October 16, 2026 (Optimus_v9.3.0)SoftwareOpen
WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...
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October 16, 2026 (Optimus_v9.3.0)SoftwareOpen
Warp Analysis Research Pipelines The Warp Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia...
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October 16, 2026 (Optimus_v9.3.0)SoftwareOpen
WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...
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October 16, 2026 (Optimus_v9.3.0)SoftwareOpen
WDL Analysis Research Pipelines The WDL Analysis Research Pipelines (WARP) repository is a collection of cloud-optimized pipelines for processing biological data from the Broad Institute Data Sciences Platform and collaborators. WARP provides robust, standardized data analysis for the Broad Institute Genomics Platform and large consortia like...
