There is a newer version of the record available.

Published June 4, 2025 | Version v1
Dataset Open

African cichlid lake radiations recapitulate riverine axial morphologies through repeated exploration of morphospace

  • 1. ROR icon University of Oxford
  • 2. ROR icon University of Basel
  • 3. EDMO icon University of Basel, Department of Environmental Sciences
  • 4. ROR icon Hasselt University
  • 5. ROR icon KU Leuven
  • 6. ROR icon Royal Museum for Central Africa
  • 7. ROR icon Yale Peabody Museum
  • 8. American Museum of Natural History

Description

We present a dataset of vertebral counts, body shape measurements, and lateral radiographs for 4861 individuals representing 583 species of African cichlids. This comprehensive dataset captures the full range of axial phenotypic diversity across the group. Using phylogenetic comparative methods, we show that elongate, body plans supported by high vertebral counts, evolved in lacustrine cichlids as adaptations to pelagic, demersal, and piscivorous niches. In contrast, riverine species exhibit broader axial diversity, driven by higher rates of vertebral evolution. Axial morphospace occupancy correlates with the age of lake radiations, but divergence time alone does not explain the observed patterns. Our results suggest that axial diversity radiated outward from an ancestrally riverine morphology and underscore the utility of African cichlids as a model for studying vertebral evolution in teleosts. Please see the README.pdf file for full descriptions of each data file deposited here. Do not hesitate to contact me at callum.bucklow@biology.ox.ac.uk/c.v.bucklow@gmail.com for further information.

Files

all_specimens_vertebral_counts_body_aspect_ratios.csv

Files (24.1 GB)

Name Size Download all
md5:f7d4ada47dc2a0b8d64d1155d17f9931
1.3 MB Preview Download
md5:d373e4199a54aacadfe24fbf68de793e
2.4 GB Preview Download
md5:c2d5030a6df14f9091013acefe0adc72
8.6 GB Preview Download
md5:b06b8ebd106510dcf33ff293cfb4a261
312.4 MB Preview Download
md5:ececb751a2ea0678e02fd74c1117ce0d
150.4 kB Preview Download
md5:be62742eb6190a77c423ca2a9f9cdd05
1.9 GB Preview Download
md5:5e5fefc979c6453bdaf3099ad7564ddb
31.1 kB Preview Download
md5:12d2e75d7342e594e3f24e9c373c2829
8.2 GB Preview Download
md5:21141eaef81b1240251b983b0368a4a8
2.7 GB Preview Download
md5:97535ec7d542f4b5a242591dc1b7eb5c
137.4 kB Preview Download

Additional details

Related works

Is cited by
Preprint: 10.1101/2025.05.23.655800 (DOI)
Is published in
Preprint: 10.1101/2025.05.13.653847 (DOI)

Funding

UK Research and Innovation
Combining experimental embryology and geometric morphometrics to uncover the evolution of vertebral variability in Lake Malawi cichlids 2445747
Swiss National Science Foundation
The genomic basis of divergence and convergence in fish species-flocks 176039
Swiss National Science Foundation
The evolutionary and ecological context of adaptive radiation in cichlid and other fishes from Lake Tanganyika 208002

Software