Published July 11, 2025
| Version v3
Dataset
Open
Dataset: Single nucleotide switches confer bacteriophage resistance to Pseudomonas protegens
Contributors
Data collectors:
Project leader:
Description
Dataset containing :
- csv files : Output file of the SNPs identified in all the phage-resistant variants (C2, C4, C17 and C18).
- Excel files :
- Raw and pre-analyzed data for the bacterial growth analysis. (Bacterial_growth.xlsx)
- Raw and pre-analised data for the competition assays (Compatition assays.xlsx).
- Raw and pre-analised data for the fitness assays in planta (plant experiment.xlsx)
- Raw data of the phage adsorption assay (phage adsorption assays.xlsx)
- Code used for the analysis of all the data.
- Image and data pre analysed for the spatial distribution of the bacteria during competition in vitro (drop_competition.rar)
- Images of the colonies (GFP and red channel) in bmp format
- R code used to process and analyse this data (Phage_JV_drop.Rmd)
Files
C17_SNP.csv
Files
(73.0 MB)
| Name | Size | Download all |
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md5:fbedefbd02bdd8c8b6549210d3ea9113
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222.9 kB | Download |
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md5:62f6bf636d2323647a6d0d1f03b0a1bf
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3.7 kB | Preview Download |
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md5:42a66c224eab8fc1b0dd4a71cccfb0e8
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2.6 kB | Preview Download |
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md5:0736614441a3d7a1a91a4ce2c74a8155
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3.1 kB | Preview Download |
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md5:15770795a68576098b0ed7418041bfc8
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3.2 kB | Preview Download |
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md5:39cbbb9e2afd5512ede66e06b78b3363
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1.2 MB | Download |
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md5:8fc77b94cade732be5ea76ec81badd91
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40.1 kB | Download |
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md5:88da006dd0d2810285b239e18320f20a
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71.5 MB | Download |
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md5:3a5ce25e99509ec02a278f6329404456
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12.5 kB | Download |
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md5:46f0b8499fb4f72a36ad83d2d41e02d7
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45.7 kB | Download |
Additional details
Funding
- Swiss National Science Foundation
- NCCR Microbiomes (phase II) 225148
Dates
- Submitted
-
2024-11