Published April 25, 2025 | Version v1
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Molecular docking studies of ortho-substituted phenols to tyrosinase helps discern if a molecule can be an enzyme substrate

  • 1. GENZ-Group of Research on Enzymology, Department of Biochemistry and Molecular Biology-A, Regional Campus of International Excellence "Campus Mare Nostrum", University of Murcia, 30100 Murcia, Spain
  • 2. Group of Molecular Interactions in Membranes, Department of Biochemistry and Molecular Biology-A, Regional Campus of International Excellence "Campus Mare Nostrum", University of Murcia, 30100 Murcia, Spain
  • 3. Department of Anatomia Patologica, Hospital General Universitario Reina Sofia, Av. Intendente Jorge Palacios, 1, 30003 Murcia, Spain

Description

Dataset corresponding to manuscript:

Montenegro, M.F.; Teruel, J.A.; Garcia-Molina, P.; Tudela, J.; Rodriguez-Lopez, J.N.; Garcia-Canovas, F.; Garcia-Molina, F.
Molecular docking studies of ortho-substituted phenols to tyrosinase helps discern if a molecule can be an enzyme substrate
Int. J. Mol. Sci. 2024, 25, 6891, 14 pages.
ISSN: 1661-6596, EISSN: 1422-0067.
©2024. This manuscript version is made available under the CC-BY 4.0 license http://creativecommons.org/licenses/by/4.0/
This document is the Published Manuscript version of a Published Work that appeared in final form in the International Journal of Molecular Sciences.
To access the final edited and published work see https://doi.org/10.3390/ijms25136891

Abstract (English)

Phenolic compounds with a position ortho to the free phenolic hydroxyl group occupied can be tyrosinase substrates. However, ortho-substituted compounds are usually described as inhibitors. The mechanism of action of tyrosinase on monophenols is complex, and if they are ortho-substituted, it is more complicated. It can be shown that many of these molecules can become substrates of the enzyme in the presence of catalytic o-diphenol, MBTH, or in the presence of hydrogen peroxide. Docking studies can help discern whether a molecule can behave as a substrate or inhibitor of     the enzyme. Specifically, phenols such as thymol, carvacrol, guaiacol, eugenol, isoeugenol, and ferulic acid are substrates of tyrosinase, and docking simulations to the active center of the enzyme predict this since the distance of the peroxide oxygen from the oxy-tyrosinase form to the ortho position of the phenolic hydroxyl is adequate for the electrophilic attack reaction that gives rise to hydroxylation occurring.

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Additional details

Related works

Is source of
Journal article: 10.3390/ijms25136891 (DOI)
Other: https://zenodo.org/records/15278231 (URL)

Funding

Fundación Séneca - Agencia de Ciencia y Tecnología de la Región de Murcia
Reprogramacion epigenetica y metabolica inducida por nuevas terapias hipometilantes como aproximacion para mejorar la respuesta a la inmunoterapia de tumores epiteliales de melanoma y mama 20809/PI/18
Fundación Séneca - Agencia de Ciencia y Tecnología de la Región de Murcia
Cultivo de diatomeas del Mar Menor, composición bioquimica y obtencion de compuestos de valor añadido. 20961/PI/18

Dates

Created
2024-05-20
Research group
Issued
2024-06-23
Published in Journal
Available
2025-04-25
Published in Zenodo