Published April 2, 2024 | Version v0.7.0
Software Open

neurolib-dev/neurolib: v0.7.0

Creators

  • 1. Technische Universität Berlin
  • 2. National Institute of Mental Health // Seerlinq
  • 3. The Brain and Data Science Group at Charité
  • 4. University of Cologne

Description

This new release introduces a new optimal control framework by @lenasal, new AAL2 lead-field matrices by @orabe and @Wirkungstreffer, and many small fixes by @1b15.

What's Changed

  • fixed bug in fhn, hopf, wc, ww models: copy params by @lenasal in https://github.com/neurolib-dev/neurolib/pull/232
  • removed Dmat_ndt as param set in timeIntegration file by @lenasal in https://github.com/neurolib-dev/neurolib/pull/234
  • moved computedelaymatrix function to /utils/model_utils by @lenasal in https://github.com/neurolib-dev/neurolib/pull/235
  • Fix numpy new version errors by @jajcayn in https://github.com/neurolib-dev/neurolib/pull/238
  • corrected index of rates_exc in computation of IA_rhs by @lenasal in https://github.com/neurolib-dev/neurolib/pull/237
  • Kuramoto dev by @bramantyois in https://github.com/neurolib-dev/neurolib/pull/239
  • aln: fix index of input from i to i-1 by @caglorithm in https://github.com/neurolib-dev/neurolib/pull/240
  • Simplify kuramoto time integration by @lenasal in https://github.com/neurolib-dev/neurolib/pull/244
  • aln input_vars by @lenasal in https://github.com/neurolib-dev/neurolib/pull/243
  • Differentiale static and time-dependent inputs in WC and WW model by @lenasal in https://github.com/neurolib-dev/neurolib/pull/241
  • Minor Docs Fixes by @1b15 in https://github.com/neurolib-dev/neurolib/pull/251
  • Optimal Control extension by @lenasal in https://github.com/neurolib-dev/neurolib/pull/247
  • Bug Fix: Setting value of tau_inh in timeIntegration by @Andrew-Clappison in https://github.com/neurolib-dev/neurolib/pull/260
  • Revise control tests by @lenasal in https://github.com/neurolib-dev/neurolib/pull/258
  • Added control interval by @lenasal in https://github.com/neurolib-dev/neurolib/pull/256
  • Fix bug in fhn and hopf OC by @lenasal in https://github.com/neurolib-dev/neurolib/pull/255
  • Directional sparsity cost functional by @lenasal in https://github.com/neurolib-dev/neurolib/pull/259
  • Lead field matrix by @Wirkungstreffer in https://github.com/neurolib-dev/neurolib/pull/249
  • feat: Adding Lead-Field Matrix for AAL2 Atlas by @orabe in https://github.com/neurolib-dev/neurolib/pull/248
  • spring cleaning: removing bugs and code smells by @1b15 in https://github.com/neurolib-dev/neurolib/pull/261

New Contributors

  • @bramantyois made their first contribution in https://github.com/neurolib-dev/neurolib/pull/239
  • @1b15 made their first contribution in https://github.com/neurolib-dev/neurolib/pull/251
  • @Andrew-Clappison made their first contribution in https://github.com/neurolib-dev/neurolib/pull/260
  • @Wirkungstreffer made their first contribution in https://github.com/neurolib-dev/neurolib/pull/249
  • @orabe made their first contribution in https://github.com/neurolib-dev/neurolib/pull/248

Full Changelog: https://github.com/neurolib-dev/neurolib/compare/v0.6.2...v0.7.0

Files

neurolib-dev/neurolib-v0.7.0.zip

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Additional details

Related works

Is supplement to
Software: https://github.com/neurolib-dev/neurolib/tree/v0.7.0 (URL)