Published December 21, 2024 | Version v0.10.3
Software Open

cooler

Description

Cooler is a Python support library for .cool files: an efficient storage format for high resolution genomic interaction matrices. The cooler package aims to provide the following functionality: * Build contact matrices at any genomic resolution. * Query contact matrices. * Export and visualize the data. * Perform scalable out-of-core operations on the data. * Provide a clean and well-documented Python API to interact with the data. Follow cooler development on GitHub.

Notes

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Files

open2c/cooler-v0.10.3.zip

Files (11.4 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/open2c/cooler/tree/v0.10.3 (URL)

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