Published December 21, 2024
| Version v0.10.3
Software
Open
cooler
Description
Cooler is a Python support library for .cool files: an efficient storage format for high resolution genomic interaction matrices. The cooler package aims to provide the following functionality: * Build contact matrices at any genomic resolution. * Query contact matrices. * Export and visualize the data. * Perform scalable out-of-core operations on the data. * Provide a clean and well-documented Python API to interact with the data. Follow cooler development on GitHub.
Notes
Files
open2c/cooler-v0.10.3.zip
Files
(11.4 MB)
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Additional details
Related works
- Is supplement to
- Software: https://github.com/open2c/cooler/tree/v0.10.3 (URL)
Software
- Repository URL
- https://github.com/open2c/cooler