Published January 27, 2022
| Version v0.5.16.2
Software
Open
kundajelab/tfmodisco: Bringing down Leiden memory use - patch 1
Creators
- 1. Stanford University
- 2. University of Virginia
- 3. Stony Brook University
Description
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/99
- Removed some tolist() commands that might have been contributing to memory explosion
- More detailed printouts of memory usage
- Made it possible to specify a different number of parallel runs for the main clustering step via the n_cores_mainclustering argument to TfModiscoSeqletsToPatternsFactory
Files
kundajelab/tfmodisco-v0.5.16.2.zip
Files
(15.9 MB)
| Name | Size | Download all |
|---|---|---|
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md5:65a75e5e5ded030e4538f86555a616c1
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15.9 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/kundajelab/tfmodisco/tree/v0.5.16.2 (URL)