Additional information for "Global shortfalls in documented actions to conserve biodiversity"

Data, code and workflow to support findings of the paper "Global shortfalls in documented actions to conserve biodiversity". This ZIP folder contains an R project with a workflow to reproduce the results, figures, manuscript and associated supplementary material.

Code

The R code for all processing and analysis is all contained within the 'code' subdirectory. Scripts are numbered to indicate the running order. R markdown code and associated files (e.g. BIB and CSL files) for producing the documents are contained within the 'manuscript' subdirectory. All of the code is also available on GitHub. 

Data

The 'data' subdirectory contains everything needed to run the code as a demo. The original source data is not included because it is not ours to share. The processed data are available, at the path 'data/analysis'. These data are the same as used in the published manscript, thus enabling the results, figures and manuscript to be reproduced.

Figures

Most of the figures are generated by running the code with the data provided. Two figures are provided in the 'figs' subdirectory because they were created semi-manually:

•  Figure 4 - the R code produces a CSV file ('figs/Fig4.csv') that was used to manually create Figure 4, first in PowerPoint ('figs/Fig4.pptx') and then exported to PNG ('figs/Fig4.png')
• Figure S1 - the code produces the individual schematic diagrams of Figure S1, which were combined together in Inkscape ('figs/FigS1.svg') and then exported to PNG ('figs/FigS1.png')