Published January 1, 2024 | Version v1
Journal article Open

Deep learning applications in protein crystallography

  • 1. Biozentrum, University of Basel, Basel, Basel-Stadt, Switzerland
  • 2. ROR icon Paul Scherrer Institute

Description

Deep learning techniques can recognize complex patterns in noisy, multidimensional data. In recent years, researchers have started to explore the potential of deep learning in the field of structural biology, including protein crystallography. This field has some significant challenges, in particular producing high-quality and well ordered protein crystals. Additionally, collecting diffraction data with high completeness and quality, and determining and refining protein structures can be problematic. Protein crystallographic data are often high-dimensional, noisy and incomplete. Deep learning algorithms can extract relevant features from these data and learn to recognize patterns, which can improve the success rate of crystallization and the quality of crystal structures. This paper reviews progress in this field.

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Additional details

Funding

NanED – Electron Nanocrystallography 956099
European Commission
Single molecule electron diffraction 201012
Swiss National Science Foundation

Dates

Accepted
2023-11-23