Published September 1, 2021
| Version v1
Dataset
Open
TCGA WES processed by Demichelis Lab
Description
Here we provide processed data of the TCGA WES collection related to the study by Ciani Y. et al, "Allele-specific informed genomic analysis identifies loss of heterozygosity as a common trait of impaired tumor-suppressive processes" that implements the SPICE pipeline. Processed data includes SNV/indels, genomic calls as allele specific copy number, and LOH/gene expression linear models results. For more information visit https://github.com/demichelislab/SPICE-pipeline
Files
accLOH_lm.txt
Files
(1.4 GB)
| Name | Size | |
|---|---|---|
|
md5:ca032629e0ea7ade3a104d1a7b414a8a
|
19.6 MB | Download |
|
md5:cc80b68a64fd9a28c3e27ba476a22e68
|
73.4 kB | Download |
|
md5:a156537bc3903beb9b79c333b066ef4b
|
957.6 kB | Download |
|
md5:71c7639adc6a3b40d7d904ee30221c28
|
2.7 MB | Preview Download |
|
md5:eacc765d3fce5077112d29721a34819b
|
66.9 MB | Download |
|
md5:340315a6c1b155db4ddc3d24bcab78cd
|
252.5 kB | Download |
|
md5:7df992af307e576dbc0be86d605c29ba
|
9.9 MB | Download |
|
md5:e8eebfe7c798313858911c96b049c834
|
3.5 MB | Preview Download |
|
md5:56358da5019a7cc4c9d6006dec26edfe
|
148.5 MB | Download |
|
md5:9fe73d9957d8686dbe48dd0cefa73a16
|
537.5 kB | Download |
|
md5:30e008e28778f9b5c7c777e05e350360
|
7.3 MB | Download |
|
md5:91d292d38f41dd37458b5b0549b34028
|
3.8 MB | Preview Download |
|
md5:a0282c00769fbe194e8841b3234780b0
|
47.2 MB | Download |
|
md5:ba1434a19de27d768799a8a699ff0209
|
718.2 kB | Download |
|
md5:33215fe48a54eefc95025368e7d8f98c
|
6.0 MB | Download |
|
md5:21a599693065de0f5559e86b7dac06a9
|
3.0 MB | Preview Download |
|
md5:da7f988ab6fcac343569a113d4e5f9fc
|
62.9 MB | Download |
|
md5:79828694b12c2aadfeb7d7c89b7ba065
|
102.0 kB | Download |
|
md5:2ebb827923084b5caa7f22df71a7d88f
|
5.1 MB | Download |
|
md5:27f36f1ac9acc1e0e4cfe4811ccab830
|
1.4 MB | Preview Download |
|
md5:86194439e79c6c60d923940f2759e204
|
78.5 MB | Download |
|
md5:f70cf5e988308384013de4dbe723b146
|
395.9 kB | Download |
|
md5:d9de9d2280806f6c8060e7b041271146
|
7.7 MB | Download |
|
md5:462828a19aa186f4f058024d1247a4b7
|
3.5 MB | Preview Download |
|
md5:ae7758bfc2259c03078cf37e610f713a
|
12.7 MB | Download |
|
md5:4711b6439b44f3161d690ceefb8de1b5
|
21.0 kB | Download |
|
md5:a89cb25cca5e07e386724f716b89dae9
|
266.7 kB | Download |
|
md5:4fc8fa9800f9a869907f760ff929ab49
|
1.9 MB | Preview Download |
|
md5:357f998d3b9c9274a1942bafd0c9c47f
|
44.3 MB | Download |
|
md5:78295e07cffbbf38c32d218a0cc1fd9d
|
192.3 kB | Download |
|
md5:7c43586b8ccdf86fd2a55132686244cb
|
1.8 MB | Download |
|
md5:d2f699617e42f2de0ee0e517e9739553
|
1.5 MB | Preview Download |
|
md5:596864b6b4fce470d9ba5762ab858ad1
|
25.4 MB | Download |
|
md5:cd680b4a7264fa6db8b1ae6dfade6fd3
|
102.5 kB | Download |
|
md5:572a4e22fbde2fa6f6f88171e9ad3242
|
1.1 MB | Download |
|
md5:1d41f323c577454a8fa5324eac593c5b
|
1.8 MB | Preview Download |
|
md5:e8f57d9b1b6e03158293dc7a7f2a5e61
|
5.0 MB | Download |
|
md5:f60c9e1b8b3f765888b70154085c76f8
|
2.4 kB | Download |
|
md5:6225cdec6b972fc23bf2dcd0a22f45d0
|
25.0 kB | Download |
|
md5:9f721c8a3b481b968791d7704b1a90b2
|
155 Bytes | Preview Download |
|
md5:487fd5e5b7acc242a3bd7fbd0bd90305
|
98.4 MB | Download |
|
md5:761b5ba4c3d60ecdbf8d7d99f1421b28
|
169.9 kB | Download |
|
md5:80c32562f648abdeb451e1a81338acce
|
2.1 MB | Download |
|
md5:75a33e29b82caa1d1c30135722356f09
|
2.3 MB | Preview Download |
|
md5:ad7b9cf68960773f20c2eaa542a9e0d1
|
35.1 MB | Download |
|
md5:68dc4065f0f8ff2c86af1d92b058d378
|
124.7 kB | Download |
|
md5:9dc6b0a7f417f76690a4c1ff790a8082
|
2.6 MB | Download |
|
md5:a19c2bcd3328d7f99910a58520ebb2ce
|
1.8 MB | Preview Download |
|
md5:45636504a51907e381a007710c7838db
|
59.5 MB | Download |
|
md5:5df4059b031807f7290a29f1cc9679cc
|
336.2 kB | Download |
|
md5:f87c8accf6415d592602019997eb3bb5
|
10.5 MB | Download |
|
md5:e4b799b3874c8a0c4db1455ddee90198
|
3.6 MB | Preview Download |
|
md5:0c4e59708f44f95546ae092f29047b89
|
73.8 MB | Download |
|
md5:6cf48d6c7abecf4c3b78a6d95788fe48
|
407.0 kB | Download |
|
md5:c0e939fd15f5cef1ad7388a6be8bdc18
|
12.1 MB | Download |
|
md5:f83da669efceef9bddd71fdb02cc4c30
|
3.8 MB | Preview Download |
|
md5:53365a22b1f298ed58f021ea08ede410
|
18.1 MB | Download |
|
md5:827ac46e83cf3f3d31c1eae375ca7b0b
|
35.6 kB | Download |
|
md5:5462eb691a0419aada7cc20b90a91a82
|
477.5 kB | Download |
|
md5:59310312764fdefdaca87dbbbdb9032e
|
1.7 MB | Preview Download |
|
md5:5406d55432739c0240e78581b89171ad
|
77.3 MB | Download |
|
md5:14b1972db0b4a3ba51995c53bf85489b
|
480.5 kB | Download |
|
md5:fe85591177cd37f5fbb0edc3dd123bb2
|
3.1 MB | Download |
|
md5:513191718362667da94d5063798a5a87
|
3.4 MB | Preview Download |
|
md5:86a83a528d9a7b9be7d639988df11c0d
|
17.3 MB | Download |
|
md5:f2c9bb705a4e19c4c4084568635ceb1b
|
29.6 kB | Download |
|
md5:fb8ca2a1294b8f0b640e8500a21c6499
|
487.9 kB | Download |
|
md5:243313dde17f59701cc8570a62dd5012
|
1.8 MB | Preview Download |
|
md5:154b9e909af74f1214fac851f2c41eb9
|
34.7 MB | Download |
|
md5:e665b075283c1039ea172e91efa859e0
|
16.5 kB | Download |
|
md5:a90fe29934ec83218455ce17b9a9e8c8
|
225.5 kB | Download |
|
md5:61d14fadef808872b3eaa759df5f7abb
|
1.3 MB | Preview Download |
|
md5:142d0d73e3f21a4e2c684c8e8aaadf28
|
71.7 MB | Download |
|
md5:a40deb52bb49057f02f5804058c01fd3
|
144.6 kB | Download |
|
md5:deef0c5a91e9e28b553425b29c59914d
|
2.5 MB | Download |
|
md5:2aba5a1fdab8dadc786a9883aa9ea02a
|
1.6 MB | Preview Download |
|
md5:46f08ff66e7ff827e1c921dbade06aa8
|
24.0 MB | Download |
|
md5:6d0c61ff7b4d6f7229631509c0fdcc65
|
160.0 kB | Download |
|
md5:7d762aab3222312e54f36699a7a5fa27
|
2.2 MB | Download |
|
md5:9bc5cddc276751542cb59faaef9ed691
|
2.4 MB | Preview Download |
|
md5:4108dbb5b26a447bd2fee7267bdaf840
|
43.1 MB | Download |
|
md5:41762d6a9cbe8ec3176f6ee76c802162
|
141.7 kB | Download |
|
md5:e2bc29aff4ff7ed4a6d143c837670147
|
2.3 MB | Download |
|
md5:09837a80bd5f9ff0d4f82ae1329d92a7
|
3.5 MB | Preview Download |
|
md5:2a6bc4d4c3c3947e451b91b630adbc38
|
21.5 MB | Download |
|
md5:f73ec899f4abedd9bfd5c47847e374aa
|
46.3 kB | Download |
|
md5:9027105d63332ff05d22db3340fb1622
|
6.5 MB | Download |
|
md5:0a0cbac83182c90356407bc5f8d89791
|
2.1 MB | Preview Download |
|
md5:c69476f7e71346d976a595b33c0e28d0
|
57.2 MB | Download |
|
md5:031d3167cf94378ce04912adc813ab02
|
1.8 MB | Download |
|
md5:2a4e41d6ea1cda6bf4f2b9b5dee1da05
|
11.5 MB | Download |
|
md5:b621a64fcb35b3a4bf6a438fb853d445
|
3.6 MB | Preview Download |
|
md5:90712a6f3963cfea32b22280dbf93cda
|
25.0 MB | Download |
|
md5:3b1feff8fde2ab67336eaf3cba60497e
|
23.9 kB | Download |
|
md5:f9118b5979d0281c108f492f4b9d1b46
|
264.1 kB | Download |
|
md5:8b21cf66f10cbb1887805462719edb86
|
2.1 MB | Preview Download |
|
md5:3334a7fa750816be2aefe05281f03e46
|
19.0 MB | Download |
|
md5:277f097cd1906ccc0dacd570d9841bb3
|
389.8 kB | Download |
|
md5:b3d9f7cda7725e57db95a71c7dab2c69
|
195.9 kB | Download |
|
md5:282ce7919c6dba45bb4bbbc21ce39fe9
|
222.7 kB | Preview Download |
|
md5:396d0987b260e97aadc97d9a739218ee
|
26.1 MB | Download |
|
md5:e0809511c33d22aef70f7ce7bf5b2bf5
|
597.1 kB | Download |
|
md5:884bdb1d5ebd5d28f40e0db98f261915
|
10.0 MB | Download |
|
md5:0406c70c08e18f863093864f17dc90c5
|
2.1 MB | Preview Download |
|
md5:5648bd6c84f8afd8ab1c4afcaf15823b
|
14.1 MB | Download |
|
md5:4cc6bbd3b862847fc6f5ef9a6984b305
|
11.2 kB | Download |
|
md5:6aed8935421e298bd4e9b32e5c121d6b
|
168.0 kB | Download |
|
md5:70c9a06ed2e501b53f106308a994d46b
|
550.1 kB | Preview Download |