Published June 3, 2020 | Version v1
Dataset Open

Data from: Geographic patterns in colonial reproductive strategy in Myrmecina nipponica: links between biogeography and a key polymorphism in ants

  • 1. Tokyo Metropolitan University
  • 2. Tokyo University of Agriculture
  • 3. Tamagawa University
  • 4. Flinders University
  • 5. Kagawa University

Description

The ability to express different phenotypes can help define species distributions by allowing access to, and exploitation of, new environments. Social insects employ two markedly different reproductive strategies with contrasting cost/benefit characteristics: independent colony foundation (ICF), which is associated with high dispersal range and high risk, and dependent colony foundation (DCF), characterized by low risk but low dispersal. The ant Myrmecina nipponica employs both of these strategies, with the frequency of each apparently varying between populations. We combine molecular data with data on reproductive strategy from different populations of this species throughout Japan to explore how this polymorphism is linked to environmental factors and if this relationship can help explain the current and historical biogeography of this species. Reproductive strategy exhibited a strong geographic pattern, with ICF predominant in southern populations and DCF more common in northern and southern highland populations. Molecular analyses clearly divided populations into broad geographic regions, with the southern-lowland populations basal to (southern-highland (+ northern)) populations. Intra-population polymorphism in colony founding strategy was widespread, and polymorphism was reconstructed as the likely ancestral state. The frequency of different strategies was linked with climate, with DCF more common in colder areas. A recent inferred origin to the northern lineage suggests that colonization of northern Japan was a rapid event coincident with warming at the end of the last glacial maxima, likely facilitated by the cold-adaptive advantages of DCF. We discuss how such polymorphisms could help explain the biogeography of this and other social insects.

Notes

These data include:

  1. Supporting methods and results = additional details for methods described in the main text and additional data analyses
  2. The following genetic datasets for Myrmecina nipponica in Japan.
    • MIG_seq_SNPs-3716.fa = fasta file containing SNP data from MIG-Seq analysis for 39 indivdiuals from 13 Japanese populations and one outgroup.
    • SNP_dataset_-_1564.fa = fasta file containing SNP data from MIG-Seq analysis for 37 individuals from 11 Japanese populations and one outgroup following filtering for missing data.
    • Demographic_data.dat = Tab-delimited file containing demographic data from seven populations of M. nipponica in Japan over multiple years.
    • Binary_SNP_matrix_for_PCA.dat = Tab-delimited file of binary (presence/abosence) data of 3716 SNPs.
    • COI_dataset.nexus = A nexus alignment for the 1281 bp region of the Cytochrome Oxidase subunit 1 for 51 individuals from 13 populations plus outgroups. These data are available from GenBank under accession numbers KX016598 - KX016638, KX021820 and MG592252 - MG592256.

Funding provided by: Japan Society for the Promotion of Science
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100001691
Award Number: JSPS KAKENHI #25440187

Funding provided by: Tokyo Metropolitan University
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100010236
Award Number:

Funding provided by: Tokyo Metropolitan University
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100010236
Award Number:

Funding provided by: Iwate University
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100003983
Award Number:

Files

Files (878.9 kB)

Name Size Download all
md5:57f0303a53318cb551e4f013223d8923
321.8 kB Download
md5:0bb24acf96e4cf02a7ea4111fa12f064
69.9 kB Download
md5:52d9041fe939a0fe6be928349f0572ec
8.1 kB Download
md5:1309ecd824260f1d5672ca18e6fe9eb4
135.6 kB Download
md5:ac15d96f980c86dc9704be77a8674c79
58.2 kB Download
md5:807fd22cb7bea78b9e157fc36463cff0
285.2 kB Download