Published June 3, 2022
| Version cherri v0.8
Dataset
Open
Cherri - Accurate detection of functional RNA-RNA interactions sites
Creators
-
1.
University of Freiburg
Description
CheRRI - Pipeline for the Identification of putative RNA-RNA interaction sites.
This repository contains all CheRRI's models computed and mentioned in the content.txt, listing data and their descriptions. All models can be used to classify interaction sites in CheRRI's eval mode.
The source code for CheRRI is avalbile on GitHub and can be cited using this Software Heritage citation:
- Müller T, Mautner S, Videm P, Eggenhofer F, Raden M, Backofen R (2024) CheRRI - Accurate classification of the biological relevance of putative RNA-RNA interaction sites (Version 0.8). [Computer software]. Software Heritage, https://archive.softwareheritage.org/swh:1:snp:ebac091117f9c46fb5f0fedd3ef23ec2905ced6c;origin=https://github.com/BackofenLab/Cherri
The pipeline contains Machine Learning segments which were annotated using DOME:
Files
content.txt
Files
(917.9 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:b4f5446d24b5edf610589b04c1e6ced9
|
1.4 kB | Preview Download |
|
md5:0e37fbc6dac3762ebd106b89acfcf42e
|
316.2 MB | Preview Download |
|
md5:0948f9522d713a88fff57c47bdbc0346
|
244.0 MB | Preview Download |
|
md5:cbf7aae7c0d3579d4d4630c43a094540
|
40.7 MB | Preview Download |
|
md5:15d6e400426adb6986827268c7244ee7
|
41.6 MB | Preview Download |
|
md5:fd71372ad78505a032a3401c143d091f
|
66.5 MB | Preview Download |
|
md5:8915288654a5131183fcdc76a8c4dd83
|
70.5 MB | Preview Download |
|
md5:855b2fc824cebb725c93d47242a4c57b
|
95.6 MB | Preview Download |
|
md5:bad99d4da1bb6d5c18cf5fd04e89d3d9
|
42.8 MB | Preview Download |
Additional details
Dates
- Updated
-
2024-01-24