Published July 29, 2024 | Version v2024-07-29
Software Open

monarch-initiative/MAxO: 2024-07-29 Release

  • 1. The Jackson Laboratory for Genomic Medicine
  • 2. Semanticly
  • 3. Critical Path Institute
  • 4. Berlin Institute of Health
  • 5. @TheJacksonLaboratory

Description

Added many new terms this release to answer the annotation needs. Also added 'route of administration' for ease of annotation.

Content changes

<details><summary>New terms added</summary>

Add new branch: Route of administration (topical, transdermal, enteral, intravenous, vaginal, rectal, ocular, eye drop, intravitreal, nasal, otic, parenteral, oral, buccal, sublingual) hearing aid use with FM amplification denture usage dental implantation dental bridge implantation dopamine replacement agent therapy percutaneous umbilical blood sampling thoracoamniotic shunt fetoscopic laser coagulation myelomeningocele repair fetoscopic tracheal occlusionon parathyroid hormone treatment monoamine-depleting agent therapy manganese chelator therapy fluid restriction recommendation fat diet recommendation orotracheal intubation nasotracheal intubation orogastric intubation nasogastric intubation fiberoptic intubation topical corticosteroid therapy eye drop-lowering therapy canaloplasty ab externo canaloplasty ab interno canaloplasty with suprachoroidal drainage mini-canaloplasty canaloplasty without catheterization minimally invasive glaucoma surgery preserflo microshunt MIGS pilocarpine therapy topical pharmacotherapy emollient therapy steroid agent therapy urea-hydrocortisone therapy stool softener therapy laser surgery procedure phototherapeutic keratectomy soft bandage contact lens close anterior stromal puncture alcohol delamination of corneal epithelium corneal epithelial debridement corneal epithelial debridement with diamond burr polishing artificial tears therapy sodium chloride hypertonicity ophthalmic ointment therapy punctal occlusion autologous serum eye drop therapy nighttime eye ointment therapy amniotic membrane transplantation RNAi therapy antisense oligonucleotide inhibitor therapy patient reproductive history age at menarch assessment age at menopause assessment tubal ligation removal of cyst removal of ovarian cyst removal of kidney cyst streptococcal screening rapid strep test depth perception assessment sensory integration therapy tape stripping procedure sleep apnea treatment fetal cell transplantation transcranial magnetic stimulation karyotyping chromosomal microarray testing targeted gene sequencing single gene testing gene panel testing methylation testing cell-free DNA testing reproductive technology treatment eye drop therapy thalidomide agent therapy complement component 5 inhibitor agent therapy 4-hydroxyphenylpyruvate dioxygenase inhibitor agent therapy add mevalonolactone therapy antimyopathic therapy alpha-melanocyte stimulating hormone therapy carbonic anhydrase inhibitor agent therapy vmat2 inhibitor therapy thalidomide avoidance recomendation coagulation factor therapy

</details>

What's Changed

  • Feature/maxoa2 by @iimpulse in https://github.com/monarch-initiative/MAxO/pull/642
  • Route of administration branch by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/644
  • add hearing aid use with FM amplification by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/645
  • Issue 331 denture by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/646
  • add dopamine replacement agent therapy by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/647
  • Prenatal terms by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/648
  • add monoamine-depleting agent therapy by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/649
  • add manganese chelator therapy #438 by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/650
  • add fluid restriction term #456 by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/655
  • added high fat diet intake. #476 by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/656
  • Add to intubation branch by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/657
  • mmunoglobulin infusion therapy #493 by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/658
  • Glaucoma treatment terms by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/659
  • Topical agent therapy by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/660
  • Surgery related issues by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/661
  • Eye therapies by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/662
  • Rnai and antisense by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/663
  • Medical history by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/664
  • removal of ovarian cyst by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/665
  • Include terms by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/666
  • added fetal cell transplantation close issue #653 by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/667
  • add TMS close #652 by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/668
  • Diagnostic genetic tests by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/669
  • cell-free DNA testing issue #623 by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/670
  • add reproductive technology treatment by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/671
  • Pharmacotherapy by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/672
  • add coagulation factor therapy #343 by @LCCarmody in https://github.com/monarch-initiative/MAxO/pull/673

Full Changelog: https://github.com/monarch-initiative/MAxO/compare/v2024-05-24...v2024-07-29

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monarch-initiative/MAxO-v2024-07-29.zip

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