Relevant datasets for sgRNA library characterization tasks

This contains all the relevant datasets that were downloaded, used and generated to execute the sgRNA library characterization in the notebook sgRNA_Ryvu.ipynb.

This inludes a list of files:

1. the hg38 fasta file in chunks
2. The necessary indexes build with Bowtie 2
3. The relevant mapped sam and bam files that are indexed and sorted
4. The hg38 gtf file for gene annotation
5. Relevant GDCquery download file for BRCA
6. Final gene expresssion matrix file in CSV format.