There is a newer version of the record available.

Published August 19, 2023 | Version v1.7.2
Software Open

wilsontelab/svx-mdi-tools: v1.7.2 - refactor svAmplicon

  • 1. University of Michigan

Description

After alpha testing, this is considered a stable beta release of svAmplicon. The overall approach and logic are the same, some minor updates include:

  • masking, rather than merging, of discarded junctions and merge failures
  • reporting on junction bases, and using insertions bases to track junction identity
  • implementation of bandwidth in alignment to help report SVs as splits, not CIGAR operations
  • improvements in app, including full support for keep/reject and circle plots

Files

wilsontelab/svx-mdi-tools-v1.7.2.zip

Files (1.8 MB)

Name Size Download all
md5:395fece4ada40bd90471647fb12df004
1.8 MB Preview Download

Additional details