Genomic Markers Associated with Cytomegalovirus DNAemia in Kidney Transplant Recipients
Creators
- 1. Tel Aviv University Faculty of Medicine; Edmond J. Safra Center for Bioinformatics
- 2. Johns Hopkins University School of Medicine
Description
Extended results files, supplementary data for the paper "Genomic Markers Associated with Cytomegalovirus DNAemia in Kidney Transplant Recipients". All results are provided as standard tab-delimited tables.
Supplementary methods 1 and 2 provide extended descriptions of the methodology used for cohort A and B, respectively.
All genetic association test was tested tested on each cohort separately and combined in meta-analysis. Results are limited to the 10,000 most significant variants (at most, per result file).
Table S1: "variant_calling_summary_stats.xlsx" contains summary statistics for all variants called in cohorts A and B.
Table S2: "dnaemia.cohort1.assoc.txt" genomic associations with DNAemia in Cohort A
Table S3: "dnaemia.cohort2.assoc.txt" genomic associations with DNAemia in Cohort B
Table S4: "dnaemia.meta_assoc.txt" genomic meta-associations with DNAemia in Cohorts A and B
Table S5: "cnv.results.tsv" contains gene-level results associating copy number variants with DNAemia status.
Table S6: "peak_viral_load.cohort1.assoc.txt" genomic associations with peak viral load in Cohort A
Table S7: "peak_viral_load.cohort2.assoc.txt" genomic associations with peak viral load in Cohort B
Table S8: "peak_viral_load.meta_assoc.txt" genomic meta-associations with peak viral load in Cohorts A and B
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