Published July 16, 2023 | Version v1
Journal article Open

HD-Stain example datasets - part 2

  • 1. University of Texas Southwestern Medical Center

Description

README

This dataset contains the original pathology images and their annotations calculated by HD-stain application. 

SVS: slides files

slide_id.pt:  all the detected nuclei positions and labels information. 

z.slides_folder.wsi.log for some meta information about the data.

 

For internal BioHPC users

The raw images are in folder:

/project/DPDS/Xiao_lab/shared/deep_learning_SW_RR/hd_wsi/slides_folder

he data files are from: /project/DPDS/Xiao_lab/shared/deep_learning_SW_RR/hd_wsi/slides_folder

The results of whole slide nuclei segmentation are in folder:

/project/DPDS/Xiao_lab/shared/deep_learning_SW_RR/hd_wsi.outputs/slides_folder_results

Files

Files (29.9 GB)

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