Published July 10, 2023
| Version v1
Dataset
Open
Petascale Homology Search for Structure Prediction - MSAs
Description
Multiple sequence alignments (MSAs) of CASP15 targets used in "Petascale Homology Search for Structure Prediction" publication.
Each MSA is constructed from a combination of different sequence databases, using different search tools, 1) ColabFoldDB (CFDB) using ColabFold search module, 2) Sequence Read Archive (SRA) using MMseqs2, and 3) UniRef30+BFD using HHblits (HH).
- Queries: Regular CASP15 TS targets, excluding TBM-easy
- MSAs (A3M)
- CFDB (cfdb.tar.gz)
- SRA + CFDB (sra_cfdb.tar.gz)
- HH + CFDB (hh_cfdb.tar.gz)
- HH + SRA + CFDB (hh_sra_cfdb.tar.gz)
Files
Files
(187.4 MB)
Name | Size | Download all |
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md5:602e859e98b7914646afad46784dcfc0
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21.5 MB | Download |
md5:c51090ae522ec04cfb03109d7b5c288f
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49.1 MB | Download |
md5:efb12bfc87549909363852ad48aaa863
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68.4 MB | Download |
md5:e13010c3bee96b783d867edde181e3ed
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48.4 MB | Download |