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Published June 25, 2023 | Version v1.0.0
Dataset Open

Supplemental Files for Schlegel et al., bioRxiv (2023)

Authors/Creators

  • 1. Department of Zoology, University of Cambridge
  • 2. Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge, UK

Description

This repository contains supplemental files for the paper "A consensus cell type atlas from multiple connectomes reveals principles of circuit stereotypy and variation" - Schlegel et al., bioRxiv (2023).

  • nblast_flywire_all_right_aba_comp.feather contains all-by-all NBLAST score for all FlyWire neurons where neurons from the left hemisphere have been mirrored to the right
  • nblast_flywire_hemibrain_comp.feather  contains NBLAST scores for FlyWire versus "hemibrain" neurons
  • nblast_flywirre_mirrored_hemibrain_comp.feather contains NBLAST scores for FlyWire versus "hemibrain" neurons where all FlyWire neurons have been mirrored
  • sk_lod_630_healed_ds2.zip contains skeletons in SWC format for all FlyWire neurons (generated from lod 1 meshes and 2X downsampled)

Additional notes:

  • all root IDs refer to the 630 release of FlyWire
  • NBLAST scores were compressed by rounding to the 4th decimal and clipping values below 0

For neuron annotations and further details please see https://github.com/flyconnectome/flywire_annotations. 

The proofreading and FlyWire resource are described in our companion paper (Dorkenwald et al., bioRxiv, 2023).

Notes

Funding for this project came from NIH NIMH BRAIN Initiative grant 1RF1MH120679-01, Wellcome Trust Collaborative Award 203261/Z/16/Z, Wellcome Trust Collaborative Award 220343/Z/20/Z, Neuronex2 award (MRC MC_EX_MR/T046279/1) and core support from the MRC (MC-U105188491).

Files

sk_lod1_630_healed_ds2.zip

Files (8.6 GB)

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md5:67021cedb6bdaa50c83158806c45fe11
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md5:7d2893aefd998f80de1b63d24880ef1b
304.2 MB Download
md5:d17b9bc4b29242f80075402f46b7bc4d
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Additional details

Funding

National Institutes of Health
Automating whole brain connectomics: development, validation, and application of an open toolkit 1RF1MH120679-01
Wellcome Trust
The connectome of olfactory memory circuits in the adult fly 203261
Wellcome Trust
A high-quality connectome of the complete adult Drosophila central nervous system 220343