lskatz/lyve-SET: v1.1.4g

An accumulation of random fixes has led to v1.1.4g. However the biggest factor in making a new release was the NCBI change from http to https, making the lambda dataset difficult to acquire without an updated release.

• edirect https fix embedded in make install 8798380
• xargs fix in a couple of scripts, replacing {} with $0 b90eae9
• C. bot presets now available
• set_diagnose checks for insert length sizes 6604151
• Array::IntSpan now installed with make install because it is a faster range class 82279e2
• Better version of makeRegions.pl, the script that will describe genomic regions, given a fasta, vcf, or bam file 09fb001
• Better version of the findPhages module 592c144
• Plugin for compatibility with Tinsel (for any plugin, you can run the plugin executable with the Lyve-SET project as a parameter) 47ee8cc
• Check for path to Java and to Grep, just in case those are not in the path e0d1573