Published February 27, 2018 | Version v2.0.1
Software Open

lskatz/lyve-SET: v2.0.1

Authors/Creators

Description

  • bwa is again an option
  • fixed samtools sort; updated samtools
  • removed index case guessing
  • removed tee from logging because you can't check the error codes
  • New presets for mycobacterium
  • New but unused script errorProneRegions.pl which detects regions that might be error prone, depending on your sequencing platform
  • More documentation including those for visualization

Files

lskatz/lyve-SET-v2.0.1.zip

Files (14.7 MB)

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Additional details

Related works

Is supplement to
https://github.com/lskatz/lyve-SET/tree/v2.0.1 (URL)