Published June 16, 2023
| Version 1.0.0
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BRK mRNA-seq quantifying bash script
Description
This script was used to quantify the expression of transcripts from single-end mRNA-seq FASTQ files via the salmon software (https://combine-lab.github.io/salmon/).
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Files
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md5:f257cd523efb35029392a8fc48cd21e2
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Additional details
References
- Patro, R., Duggal, G., Love, M. et al. Salmon provides fast and bias-aware quantification of transcript expression. Nat Methods 14, 417–419 (2017). https://doi.org/10.1038/nmeth.4197