Published June 5, 2023
| Version splitter-preprint
Software
Open
ablab/spades: SpLitteR: early access version
Authors/Creators
Description
SpLitteR is a tool that uses linked reads to improve the contiguity of HiFi assemblies. Given a linked-read library and a HiFi assembly graph in the GFA format, SpLitteR resolves repeats in the assembly graph using linked-reads and generates a simplified (more contiguous) assembly graph with corresponding scaffolds.
This is an early preview version of SpLitteR to supplement the publication.
Files
ablab/spades-splitter-preprint.zip
Files
(20.9 MB)
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md5:31616c8121ac34587e8579f3fba1eebc
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Additional details
Related works
- Is supplement to
- https://github.com/ablab/spades/tree/splitter-preprint (URL)