Published June 5, 2023 | Version v1
Dataset Open

Subset of non-redundant, high resolution multi-pass membrane protein PDB structure files from OPM

Creators

  • 1. Stockholm University

Description

A subset of OPM PDB structure files with membrane predictions curated for the MSc thesis project 'Structural characterization of triplets of transmembrane α-helical segments consecutive in sequence in integral membrane proteins: a fragment-based computational pipeline'. The dataset contains PDB files downloaded from OPM on 22/02/2023. The files are alpha-helical integral membrane proteins with at least three transmembrane regions at better than 2.7 Angtrom resolution. They are non-redundant, with a sequence identity of less than 40% based on clustering with the cd-hit algorithm. 

Files

Files (148.4 MB)

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