Published May 11, 2023 | Version v1
Dataset Open

SpliceAI_rocksdb_hg19_chr9

  • 1. Technical University of Munich

Description

SpliceAI RocksDB for chromosome 9 of hg19 as used in the AbSplice publication: https://www.nature.com/articles/s41588-023-01373-3

Precomputed SpliceAI scores for all SNVs and indels up to 4 nucleotides are stored in this database. To use this database for fast computation of SpliceAI predictions see: https://github.com/gagneurlab/spliceai_rocksdb

This is also implemented in the AbSplice package: https://github.com/gagneurlab/absplice

This dataset includes SpliceAI scores. The scores are free for academic and not-for-profit use; other use requires a commercial license from Illumina, Inc., see the GitHub repository of SpliceAI: https://github.com/Illumina/SpliceAI/tree/master

Files

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