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Published November 28, 2024 | Version v1.7.0
Software Open

ModularImageAnalysis (MIA)

  • 1. University of Bristol

Description

New modules

  • TileStack module converts a large image into a tiled stack. This also works for hyperstacks and be set to place tiles along either of the C,Z or T axes, even if these axes already have dimensions larger than 1. Includes optional tile overlap.
  • StitchTiles module will reverse tiling created using above module. Applies linear interpolation between tiles when overlap is specified. These two modules are useful when dealing with large images in DeepImageJ for example.

New module features

  • Updated ObjectMeasurementCalculator to include the same options as ImageMeasurementCalculator. These modules now use a common abstract module from which they inherit much of their functionality.
  • SetLookupTable can now also apply any LUTs available to ImageJ. Added the option to invert a LUT prior to applying it.
  • ShowImage has additional composite display modes (invert, max and min), which can be used to display inverted (on a white background) LUTs without generating a totally white image.

Other

  • Moved "Measurement" class to a slightly different location.
  • General bugfixes

Files

mianalysis/mia-v1.7.0.zip

Files (81.0 MB)

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md5:dd86e6fb3c449db0e383a8d4965c637f
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Additional details

Related works

Is supplement to
Software: https://github.com/mianalysis/mia/tree/v1.7.0 (URL)