DRESDEN-concept Genome Center

There is a newer version of the record available.

Published April 20, 2023 | Version b37921c90ecfd13245aa5742b4e40de5e6c2e6e6
Software Open

scrnaseq

Authors/Creators

  • 1. Dresden-concept Genome Center (Dresden, Germany)
  • 2. Research Core Unit Genomics (Hannover, Germany)

Contributors

  • 1. Dresden-concept Genome Center (Dresden, Germany)
  • 2. Research Core Unit Genomics (Hannover, Germany)

Description

scrnaseq is a bioinformatics analysis workflow for single-cell RNA-seq analysis. The workflow is based on Seurat, and contains additional visualisations, tables and documentation to better understand the analysis. It supports RNA sequencing data from one or more samples processed with 10X Genomics and SmartSeq-2.

The git repository with the latest code can be found at: https://github.com/ktrns/scrnaseq.

Files

scrnaseq-3a21bcda97316412fd209576fc4e371558cc2d5a.zip

Files (19.9 MB)

Additional details

Software

Repository URL
https://github.com/ktrns/scrnaseq
Programming language
R
Development Status
Active