Published April 17, 2023 | Version v2.0.0
Software Open

pr2-primers version 2.0.0

Creators

  • 1. CNRS, Station Biologique

Description

Website:  https://app.pr2-primers.org/

Changes

  • Use PR2 database version 5.0.0 with 9 levels instead of 8
  • Add 24 primers and 9 primer sets
  • Faster file loading using the qs R library
  • Allow matches to prokaryotes and plastid sequences

Files

pr2database/pr2-primers-shiny-v2.0.0.zip

Files (289.5 MB)

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md5:74ac07089600084bef5be9dca67abf31
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Additional details

References

  • Vaulot, Daniel, Frédéric Mahé, David Bass, et Stefan Geisen. 2022. « pr2-primer: an 18S rRNA primer database for protists ». Molecular Ecology Resources 22: 168‑79. https://doi.org/10.1111/1755-0998.13465.