Published June 23, 2022 | Version v1
Journal article Open

Rindifilum ramosum gen. nov., sp. nov., a new freshwater genus within the Ulvales (Ulvophyceae, Chlorophyta)

  • 1. Charles University, Faculty of Science, Benátská 433/2, 128 00, Prague (Czech Republic) veronica.malavasi80@gmail.com (corresponding author)
  • 2. Biology Centre CAS, Institute of Soil Biology, Na Sádkách 702/7, 370 05, České Budějovice (Czech Republic)
  • 3. Charles University, Faculty of Science, Benátská 433/2, 128 00, Prague (Czech Republic)

Description

Malavasi, Veronica, Klimešová, Michala, Lukešová, Alena, Škaloud, Pavel (2022): Rindifilum ramosum gen. nov., sp. nov., a new freshwater genus within the Ulvales (Ulvophyceae, Chlorophyta). Cryptogamie, Algologie 20 (8): 125-133, DOI: 10.5252/cryptogamie-algologie2022v43a8, URL: http://dx.doi.org/10.5252/cryptogamie-algologie2022v43a8

Files

source.pdf

Files (3.8 MB)

Name Size Download all
md5:0daf6ee2a81e31fe6deb258d48c9414e
3.8 MB Preview Download

Linked records

Additional details

Identifiers

References

  • BORZI A. 1883. - Saggio di ricerche Sulla biologia delle alghe. Ctenocladus, gen. nov. Studi Algologici 1: 27-50.
  • BOURRELLY P. 1972. - Les Algues d'eau douce I. Les Algues vertes. Boubee & Cie, Paris, 572 p.
  • DARRIBA D., TABOADA G. L., DOALLO R. & POSADA D. 2012. - jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9: 772. https://doi.org/10.1038/nmeth.2109
  • DARIENKO T., FRIEDL T. & PROSCHOLD T. 2009. - Desmochloris mollenhaueri - a new terrestrial ulvophycean alga from southwest African soils (Molecular phylogeny and systematics of terrestrial Ulvophyceae I). Algological Studies 129: 25-40. https:// doi.org/10.1127/1864-1318/2009/0129-0025
  • DARIENKO T. & PROSCHOLD T. 2017. - Toward a monograph of non-marine Ulvophyceae using an integrative approach (Molecular phylogeny and systematics of terrestrial Ulvophyceae II). Phytotaxa 324 (1): 1-41. https://doi.org/10.11646/ phytotaxa.324.1.1
  • FAMA P., WYSOR B., KOOISTRA W. & ZUCCARELLO G. C. 2002. - Molecular phylogeny of the genus Caulerpa (Caulerpales, Chlorophyta) inferred from chloroplast tuf A gene.Journal of Phycology 38 (5): 1040-1050. https://doi.org/10.1046/j.1529-8817.2002. t01-1-01237.x
  • GUEIDAN C., ROUX C. & LUTZONI F. 2007. - Using a multigene phylogenetic analysis to assess generic delineation and character evolution in Verrucariaceae (Verrucariales, Ascomycota). Mycological Research 111 (10): 1145-1168.https://doi.org/10.1016/j. mycres.2007.08.010
  • GUINDON S. & GASCUEL O. 2003. - A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Systematical Biology 52 (5): 696-704. https://doi. org/10.1080/10635150390235520
  • HEPPERLE D. 2004. - SeqAssem©. A sequence analysis tool, contig assembler and trace data visualization tool for molecular sequences. Available at: http://www.sequentix.de
  • HODAC L., BRINKMANN N., MOHR K. I., ARP G., HALLMANN C., RAMM J., SPITZER K. & FRIEDL T. 2015. - Diversity of Microscopic Green Algae (Chlorophyta) in Calcifying Biofilms of Two Karstic Streams in Germany. Geomicrobiology Journal 32 (3-4): 275-290. https://doi.org/10.1080/01490451.2013 .878418
  • JOHNSON L. R. & JOHN D. M. 1990. - Observations on Dilabifilum (Class Chlorophyta, order Chaetophorales sensu stricto) and allied genera. British Phycological Journal 25 (1): 53-61. https:// doi.org/10.1080/00071619000650051
  • KATANA A., KWIATOWSKI J., SPALIK K., ZAKRYS B., SZALACHA E. & SZYMANSKA H. 2001. - Phylogenetic position of Koliella (Chlorophyta) as inferred from nuclear and chloroplast small subunit rDNA. Journal of Phycology 37 (3): 443-451. https:// doi.org/10.1046/j.1529-8817.2001.037003443.x
  • KATOH K., MISAWA K., KUMA K. & MIYATA T. 2002. - MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acid Research 30 (14): 3059-3066. https://doi.org/10.1093/nar/gkf436
  • LIU B., WANG Q., LI S., FANG J., LIU J. & HU Z. 2019. - Taxonomic transfer of Gongrosira fluminensis Fritsch (Chaetophorales, Chlorophyceae) to Lithotrichon Darienko et Proschold (Ulvales, Ulvophyceae) based on morphological observation and phylogenetic analyses. Fottea 19 (1): 25-32. https://doi.org/10.5507/ fot.2018.014
  • MATTOX K. R. & STEWART K. D. 1984. - Classification of the green algae: a concept based on comparative cytology, in IRVINE D. E. G. & JOHN D. M. (eds), The Systematics of the Green Algae. Academic Press, London: 41-58.
  • MCFADDEN G. I. & MELKONIAN M. 1986. - Use of Hepes buffer for microalgal culture media and fixation for electron microscopy. Phycologia 25 (4): 551-557. https://doi.org/10.2216/ I0031-8884-25-4-551.1
  • MILLER M. A., PFEIFFER W. T. & SCHWARTZ T. 2010. - Creating the CIPRES Science Gateway for Inference of Large Phylogenetic Trees. Proceedings of Gateway Computing Environments Workshop (GCE). Institute of Electrical and Electronics Engineers, New Orleans: 1-8. https://doi.org/10.1109/GCE.2010.5676129
  • MULLINS R. F. 2007. - A molecular phylogenetic assessment of Pseudendoclonium. Master Thesis, University of Massachusetts, Amherst, USA.
  • O'KELLY C. J., WYSOR B. & BELLOWS W. K. 2004. - Collinsiella (Ulvophyceae, Chlorophyta) and other ulotrichalean taxa with shell-boring sporophytes form a monophyletic clade.Phycologia, 43 (1): 41-49. https://doi.org/10.2216/i0031-8884-43-1-41.1
  • RONQUIST F., TESLENKO M., VAN DER MARK P., AYRES D., DARLING A., HOHNA S., LARGET B., LIU L., SUCHARD M. A. & HUELSENBECK J. P. 2012. - MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematical Biology 61 (3): 539-542. https://doi.org/10.1093/ sysbio/sys029
  • SKALOUD P., NEDBALOVA L., ELSTER J. & KOMAREK J. 2013. - A curious occurrence of Hazenia broadyi spec. nova in Antarctica and the review of the genus Hazenia (Ulotrichales, Chlorophyceae). Polar Biology 36: 1281-1291. https://doi.org/10.1007/ s00300-013-1347-z
  • SKALOUD P., RINDI F., BOEDEKER C. & LELIAERT F. 2018. - Freshwater flora of central Europe. Vol. 13: Chlorophyta: Ulvophyceae. Springer Spektrum Berlin, Heidelberg, 289 p. https://doi. org/10.1007/978-3-662-55495-1
  • SWOFFORD D. L. 2003. - PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods), Version 4. Sinauer Associates, Sunderland, Massachusetts, USA.
  • SINGH G., DAL GRANDE F., DIVAKAR P. K., OTTE J., LEAVITT S. D., SZCZEPANSKA K., CRESPO A., RICO V. J., APTROOT A., DA SILVA CACERES M. E., THORSTEN LUMBSCH H. & SCHMITT I. 2015. - Coalescent-Based Species Delimitation Approach Uncovers High Cryptic Diversity in the Cosmopolitan Lichen-Forming Fungal Genus Protoparmelia (Lecanorales, Ascomycota). PLoS ONE 10 (5): e0124625. https://doi.org/10.1371/journal.pone.0124625
  • THUS H., MUGGIA L., PEREZ- ORTEGA S., FAVERO- LONGO S. E., JONESON S., O'BRIEN H., NELSEN M. P., DUQUE- THUS R., GRUBE M., FRIEDL T., BRODIE J., ANDREW C. J., LUCKING R., LUTZONI F. & GUEIDAN C. 2011. - Revisiting photobiont diversity in the lichen family Verrucariaceae (Ascomycota). European Journal of Phycology 46 (4): 399-415. https://doi.org/ 10.1080/09670262.2011.629788
  • TSCHERMAK- WOESS E. 1970. - Uber wenig bekannte und neue Flechtengonidien V. Der Phycobiont von Verrucaria aquatilis und die Fortpflanzung von Pseudopleurococcus arthopyreniae. Osterreichische Botanische Zeitung 118: 443-455. https://doi. org/10.1007/BF01376256
  • VISCHER W. 1933. - Uber einige kritische Gattungen und die Systematik der Chaetophorales.Beihefte zum Botanischen Zentralblatt, Abteilung A: Morphologie und Physiologie der Pflanzen 51: 1-101.
  • VERBRUGGEN H., MAGGS C. A., SAUNDERS G. W., LE GALL L., YOON H. S. & DE CLERCK O. 2010. - Data mining approach identifies research priorities and data requirements for resolving the red algal tree of life. BMC Evolutionary Biology 10 (16). https://doi.org/10.1186/1471-2148-10-16
  • ZWICKL D. J. 2006.- Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. Ph.D. dissertation, University of Texas, Austin. Available at: http://repositories.lib.utexas.edu/handle/2152/2666/
  • WORONICHIN N. N. & POPOVA T. G. 1929. - Lochmiopsis a new genus of algae from Fam. Leptosiraceae. Izdanie Tomskogo Otdeleniya Russkogo Botanicheskogo Obshchestva 3: 1-9.