Raw Data: Timing of Calanus finmarchicus diapause in stochastic environments
- 1. Akvaplan niva AS
- 2. University of Bergen
- 3. University of Laval
- 4. Woods Hole Oceanographic Institution
- 5. Nord University
Description
This dataset contains the raw (unprocessed) model outputs of the Individual-Based Model used to generate the research article:
Bandara, K., Varpe, Ø., Maps, F., Ji, R., Eiane, K., & Tverberg, V. (2021). Timing of Calanus finmarchicus diapause in stochastic environments. Ecological Modelling, 460, 109739.
Description
ITEM DESCRIPTION
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CONTENTS : RAW DATA FILES
UNCOMPRESSED SIZE : 19.6 GB
COMPRESSION : YES
COMPRESSED SIZE : 3.74 GB
COMPRESSION FORMAT : .ZIO
ENCRYPTION : NO
ENCRYPT METHOD : N/A
INTERNAL FILE TYPE(S) : .CSV
SOURCE : PASCAL
ID : v3.x (2020-2022)
DECRYPTION PASSWD : N/A
DOWNLOADABLE FROM : 10.5281/zenodo.7646734
DATA DESCRIPTION
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THIS ARCHIVE CONTAINS FIVE (05) DIRECTORIES. EACH FROM A SINGLE SIMULATION EXPERIMENT, INDICATED BY THE FILE NAMES.
+ DeterministicSetting : SIMULATION RAN IN DETERMINISTIC MODEL ENVIRONMENT (FIG. 2A-C)
+ STStochasticSetting : SIMULATION RAN IN SHORTER-TERM (6-H) STOCHASTIC ENVIRONMENT (FIG. 2D-F)
+ LTStochasticSetting-TFI : SIMULATION RAN IN LONGER-TERM (INTERANNUAL) STOCHASTIC ENVIRONMENT WITH GROWTH POTENTIAL VARIABILITY ONLY (FIG. 2G)
+ LTStochasticSetting-VPR : SIMULATION RAN IN LONGER-TERM (INTERANNUAL) STOCHASTIC ENVIRONMENT WITH GROWTH POTENTIAL + VISUAL PREDATION RISK VARIABILITY (FIG. 2G)
+ LTStochasticSetting-NVPR : SIMULATION RAN IN LONGER-TERM (INTERANNUAL) STOCHASTIC ENVIRONMENT WITH GROWTH POTENTIAL VARIABILITY + NON-VISUAL PREDATION RISK VARIABILITY (FIG. 2G)
KEY
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+ AnnualLog : DOUBLE VALUES OF LOW-RESOLUTION TRACKERS
+ DailyLog_I : INTEGER VALUES OF HIGH-RESOLUTION TRACKERS
+ DailyLog_R : DOUBLE VALUES OF HIGH-RESOLUTION TRACKERS
+ VerticalPosition_N : INTEGER VALUES OF POPULATION VERTICAL DISTRIBUTION (NUMBER OF INDIVIDUALS IN EACH 1M x 6H BIN)
+ VerticalPosition_CW : DOUBLE VALUES OF AVERAGE BODYMASS VERTICAL DISTRIBUTION (AVERAGE INDIVIDUAL BODYMASS IN EACH 1M x 6H BIN) :: UNUSED IN ANALYSES
+ VerticalPosition_SW : DOUBLE VALUES OF AVERAGE ENERGY RESERVE VERTICAL DISTRIBUTION (AVERAGE INDIVIDUAL ENERGY RESERVES [LIPIDSCAPE] IN EACH 1M x 6H BIN) :: UNUSED IN ANALYSES
+ FoodConcentration : DOUBLE VALUES OF 1D FOOD ENVIRONMENT
+ Irradiance : DOUBLE VALUES OF 1D SUB-SURFACE IRRADIANCE ENVIRONMENT
+ Temperature : DOUBLE VALUES OF 1D TEMPERATURE ENVIRONMENT
+ VisualPredationRisk : DOUBLE VALUES OF 1D UNSCALED VISUAL PREDATION ENVIRONMENT
NOTES
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The above attributes (excl. AnnualLog) are recorded for 100 calendar year in the LTStochasticSetting-TFI, LTStochasticSetting-VPR & LTStochasticSetting-NVPR simulations.
These are named after the year number (e.g. DailyLog_I_1, DailyLog_I_2....)
ADDITIONAL FILES
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SOME DIRECTORIES MAY CONTAIN ADDITIONAL FILES, SUCH AS THOSE USED AS PCA INPUTS. THESE ARE PROCESSED FILES.
AVERAGE ANNUAL ENVIRONMENTAL VARIABLES TRACED IN THE "ENV" DIRECTORY (ONLY FOR LONGER-TERM STOCHASTIC SIMULATIONS).
FURTHER QUESTIONS?
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Direct further question, either to: info@kanchanabandara.com (personal) or kba@akvaplan.niva.no (official)
Files
RAWDATA.zip
Files
(8.0 GB)
Name | Size | Download all |
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md5:ab0b298643ef9c57c4fb5d3359ce8a49
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Additional details
Related works
- Compiles
- Journal article: 10.1016/j.ecolmodel.2021.109739 (DOI)
References
- Bandara, K., Varpe, Ø., Maps, F., Ji, R., Eiane, K., & Tverberg, V. (2021). Timing of Calanus finmarchicus diapause in stochastic environments. Ecological Modelling, 460, 109739.