obophenotype/cell-ontology: v2024-09-26
Creators
- Shawn Tan
- Chris Mungall1
- Aleix Puig2
- Nicole Vasilevsky3
- Nico Matentzoglu4
- David Osumi-Sutherland5
- paolaroncaglia
- Damien Goutte-Gattat6
- Alexander Diehl7
- Ismail Ugur Bayindir
- CEastwood
- Alida Avola
- Tiago Lubiana8
- Anita Caron9
- Harshad1
- JoshuaFortriede
- Maria Keays
- Jasmine Belfiore
- PaulaDuekRoggli
- Ray Stefancsik
- Arlene
- Matthew Brush10
- Huseyin Kir
- Alan Ruttenberg
- Arwa Ibrahim
- ybradford
- Zoë May Pendlington9
- Jim Balhoff11
- JArgasinska
- Charles Tapley Hoyt
- 1. Lawrence Berkeley National Laboratory
- 2. EBI-EMBL
- 3. Critical Path Institute
- 4. Semanticly
- 5. www.virtualflybrain.org
- 6. University of Cambridge
- 7. University at Buffalo
- 8. University of São Paulo
- 9. EMBL-EBI
- 10. Oregon Health and Science University
- 11. @RENCI
Description
Release Notes 2024-09-26
Ontology content summary
| Metric | Value | |:------------------------------------------------|--------:| | Number of subclasses of root | 2801 | | Number of annotations on CL terms | 13346 | | Number of synonyms | 5894 | | Number of unique references | 2039 | | Number of unique references in definitions | 1465 | | Number of relationships with CL term as subject | 3815 | | Number of cellxgene classes | 686 | | Number of HRA classes | 495 |
<details> <summary>Relationships added: 389</summary>
| Subject | Predicate | Object| ----|----|----| | preameloblast (CL:0007000) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | beta2-tanycyte (CL:4042020) | RO:0002292 | PR:000007479 | | mature T cell (CL:0002419) | subClassOf (rdfs:subClassOf) | PR:000050567 | | L6 th sst GABAergic interneuron (Mmus) (CL:4023075) | subClassOf (rdfs:subClassOf) | cerebral cortex GABAergic interneuron (CL:0010011) | | cumulus cell (CL:0000711) | subClassOf (rdfs:subClassOf) | granulosa cell (CL:0000501) | | intestinal subserosal fibroblast (CL:4052005) | BFO:0000050 | UBERON:0012375 | | CD27-low, CD11b-low immature natural killer cell, mouse (CL:0002345) | subClassOf (rdfs:subClassOf) | PR:000050567 | | DN2 thymocyte (CL:0000806) | subClassOf (rdfs:subClassOf) | PR:000050567 | | substantia nigra dopaminergic neuron (CL:4042025) | subClassOf (rdfs:subClassOf) | neuron of the substantia nigra (CL:0002614) | | lung secretory cell (CL:1000272) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | mesenchymal cell (CL:0008019) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | CD16-negative, CD56-bright natural killer cell, human (CL:0000938) | subClassOf (rdfs:subClassOf) | PR:000050567 | | Kit-negative, Ly-76 high orthochromatophilic erythroblasts (CL:0002017) | subClassOf (rdfs:subClassOf) | PR:000050567 | | endocrine cell (CL:0000163) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | reticulocyte (CL:0000558) | subClassOf (rdfs:subClassOf) | PR:000050567 | | beta1-tanycyte (CL:4042019) | RO:0002292 | PR:000007479 | | neuroglioblast (sensu Nematoda and Protostomia) (CL:0000468) | RO:0002162 | NCBITaxon:33317 | | astrocyte-restricted precursor (CL:4042022) | RO:0002203 | astrocyte (CL:0000127) | | iridophore (CL:0000431) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | choroid plexus epithelial cell (CL:0000706) | subClassOf (rdfs:subClassOf) | brush border epithelial cell (CL:0000239) | | single nucleate cell (CL:0000226) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | squamous epithelial cell (CL:0000076) | BFO:0000050 | UBERON:0006914 | | salivary gland glandular cell (CL:1001596) | subClassOf (rdfs:subClassOf) | salivary gland cell (CL:0009005) | | spermatid (CL:0000018) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | erythrophore (CL:0000574) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | memory CCR4-positive regulatory T cell (CL:0001046) | RO:0002162 | NCBITaxon:9606 | | subepithelial intestinal fibroblast (CL:4052007) | subClassOf (rdfs:subClassOf) | fibroblast (CL:0000057) | | myeloid suppressor cell (CL:0000889) | subClassOf (rdfs:subClassOf) | PR:000050567 | | oxytocin receptor sst GABAergic cortical interneuron (CL:4023122) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | CD56-positive, CD161-positive immature natural killer cell, human (CL:0002338) | subClassOf (rdfs:subClassOf) | PR:000050567 | | CD34-positive, CD56-positive, CD117-positive common innate lymphoid precursor, human (CL:0001074) | subClassOf (rdfs:subClassOf) | PR:000050567 | | invertebrate nurse cell (CL:0000026) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | cumulus cell (CL:0000711) | RO:0002202 | cuboidal granulosa cell (CL:4033084) | | plasma cell (CL:0000786) | subClassOf (rdfs:subClassOf) | PR:000050567 | | oocyte (CL:0000023) | RO:0002162 | NCBITaxon:33208 | | neuronal-restricted precursor (CL:4042021) | subClassOf (rdfs:subClassOf) | neuron associated cell (sensu Vertebrata) (CL:0000123) | | Eumycetozoan cell (CL:0000257) | RO:0002162 | NCBITaxon:142796 | | glioblast (CL:0000030) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | macrophage derived foam cell (CL:0000517) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | adepithelial cell (CL:0000462) | RO:0002162 | NCBITaxon:50557 | | L4 sst Martinotti interneuron (Mmus) (CL:4023031) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | connective tissue cell (CL:0002320) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | mural granulosa cell (CL:4033067) | subClassOf (rdfs:subClassOf) | granulosa cell (CL:0000501) | | sebaceous gland cell (CL:2000021) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | muscle precursor cell (CL:0000680) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | intestinal subserosal fibroblast (CL:4052005) | BFO:0000050 | UBERON:0001243 | | luminal hormone-sensing cell of mammary gland (CL:4033058) | subClassOf (rdfs:subClassOf) | PR:000050567 | | endothelial cell (CL:0000115) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | cell of skeletal muscle (CL:0000188) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | xanthophore cell (CL:0000430) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | lung ciliated cell (CL:1000271) | subClassOf (rdfs:subClassOf) | ciliated epithelial cell (CL:0000067) | | cystoblast (CL:0000722) | RO:0002162 | NCBITaxon:6656 | | elicited macrophage (CL:0000861) | subClassOf (rdfs:subClassOf) | PR:000050567 | | sperm (CL:0000019) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | CD7-positive lymphoid progenitor cell (CL:0001028) | subClassOf (rdfs:subClassOf) | PR:000050567 | | sst GABAergic cortical interneuron (CL:4023017) | subClassOf (rdfs:subClassOf) | medial ganglionic eminence derived GABAergic cortical interneuron (CL:4023069) | | intestinal fibroblastic reticular cell (CL:4052004) | BFO:0000050 | UBERON:0001962 | | striated cell of salivary gland (CL:4052049) | RO:0002215 | GO:0036376 | | neuromast mantle cell (CL:0000851) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | circulating cell (CL:0000080) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | small intestine BEST4+ enterocyte (CL:4047051) | subClassOf (rdfs:subClassOf) | BEST4+ enteroycte (CL:4030026) | | group 2 innate lymphoid cell, human (CL:0001081) | subClassOf (rdfs:subClassOf) | PR:000050567 | | corneocyte (CL:0002153) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | transit amplifying cell (CL:0009010) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | leukocyte (CL:0000738) | RO:0002162 | NCBITaxon:7742 | | cuboidal granulosa cell (CL:4033084) | subClassOf (rdfs:subClassOf) | granulosa cell (CL:0000501) | | morula cell (CL:0000360) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | CD34-positive, CD41-positive, CD42-positive megakaryocyte progenitor cell (CL:0002023) | subClassOf (rdfs:subClassOf) | PR:000050567 | | L5 sst T-Martinotti interneuron (Mmus) (CL:4023027) | subClassOf (rdfs:subClassOf) | cerebral cortex GABAergic interneuron (CL:0010011) | | L2/3/5 fan Martinotti sst GABAergic interneuron (Mmus) (CL:4023030) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | basophil mast progenitor cell (CL:0002028) | subClassOf (rdfs:subClassOf) | PR:000050567 | | pvalb GABAergic cortical interneuron (CL:4023018) | subClassOf (rdfs:subClassOf) | medial ganglionic eminence derived GABAergic cortical interneuron (CL:4023069) | | group 3 innate lymphoid cell (CL:0001071) | subClassOf (rdfs:subClassOf) | PR:000050567 | | intestinal enteroendocrine progenitor (CL:4052006) | subClassOf (rdfs:subClassOf) | intestinal epithelial cell (CL:0002563) | | intestinal subserosal fibroblast (CL:4052005) | subClassOf (rdfs:subClassOf) | fibroblast (CL:0000057) | | melanocyte (CL:0000148) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | stem cell (CL:0000034) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | CD9-positive, CD41-positive megakaryocyte cell (CL:0002027) | subClassOf (rdfs:subClassOf) | PR:000050567 | | cuboidal granulosa cell (CL:4033084) | RO:0002207 | squamous granulosa cell (CL:4033083) | | hematopoietic lineage restricted progenitor cell (CL:0002031) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | intestinal enteroendocrine progenitor (CL:4052006) | RO:0002202 | intestinal crypt stem cell (CL:0002250) | | pre-conventional dendritic cell (CL:0002010) | subClassOf (rdfs:subClassOf) | PR:000050567 | | CD71-negative, GlyA-positive orthochromatic erythroblast (CL:0002018) | subClassOf (rdfs:subClassOf) | PR:000050567 | | pre-granulosa cell (CL:4033066) | RO:0002210 | squamous granulosa cell (CL:4033083) | | striated cell of salivary gland (CL:4052049) | RO:0002215 | GO:1990573 | | parietal epithelial cell (CL:1000452) | subClassOf (rdfs:subClassOf) | squamous epithelial cell (CL:0000076) | | follicle stem cell (sensu Arthropoda) (CL:0000441) | RO:0002162 | NCBITaxon:6656 | | muscle cell (CL:0000187) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | Kit and Sca1-positive hematopoietic stem cell (CL:0001008) | subClassOf (rdfs:subClassOf) | PR:000050567 | | tracheobronchial serous cell (CL:0019001) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | beta1-tanycyte (CL:4042019) | subClassOf (rdfs:subClassOf) | tanycyte (CL:0002085) | | Malpighian tubule stellate cell (CL:1000155) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | beta1-tanycyte (CL:4042019) | RO:0002215 | GO:0032274 | | pulmonary alveolar epithelial cell (CL:0000322) | subClassOf (rdfs:subClassOf) | squamous epithelial cell (CL:0000076) | | striated cell of salivary gland (CL:4052049) | subClassOf (rdfs:subClassOf) | duct epithelial cell (CL:0000068) | | female germ cell (CL:0000021) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | epithelial cell (CL:0000066) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | lymph node macrophage (CL:0000868) | subClassOf (rdfs:subClassOf) | PR:000050567 | | imaginal disc cell (CL:0000429) | RO:0002162 | NCBITaxon:50557 | | lower urinary tract cell (CL:1000600) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | histoblast (CL:0000373) | RO:0002162 | NCBITaxon:50557 | | bone marrow macrophage (CL:0002476) | subClassOf (rdfs:subClassOf) | PR:000050567 | | DN3 thymocyte (CL:0000807) | subClassOf (rdfs:subClassOf) | PR:000050567 | | early enterocyte (CL:4047019) | subClassOf (rdfs:subClassOf) | enterocyte (CL:0000584) | | CD34-positive, CD38-positive common lymphoid progenitor (CL:0001021) | subClassOf (rdfs:subClassOf) | PR:000050567 | | proerythroblast (CL:0000547) | subClassOf (rdfs:subClassOf) | PR:000050567 | | astrocyte-restricted precursor (CL:4042022) | BFO:0000050 | UBERON:0001017 | | scleral cell (CL:0000347) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | Kupffer cell (CL:0000091) | subClassOf (rdfs:subClassOf) | PR:000050567 | | CD56-negative, CD161-positive immature natural killer cell, human (CL:0002344) | subClassOf (rdfs:subClassOf) | PR:000050567 | | alpha-beta T cell (CL:0000789) | subClassOf (rdfs:subClassOf) | PR:000050567 | | monoblast (CL:0000040) | subClassOf (rdfs:subClassOf) | PR:000050567 | | flask cell (CL:0007023) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | NK1.1-positive natural killer cell, mouse (CL:0002438) | subClassOf (rdfs:subClassOf) | PR:000050567 | | striatal pthlh-expressing interneuron (CL:4042023) | RO:0002292 | PR:000013433 | | neuronal-restricted precursor (CL:4042021) | subClassOf (rdfs:subClassOf) | progenitor cell (CL:0011026) | | pre-granulosa cell (CL:4033066) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | striatal pthlh-expressing interneuron (CL:4042023) | subClassOf (rdfs:subClassOf) | CNS interneuron (CL:0000402) | | beta2-tanycyte (CL:4042020) | subClassOf (rdfs:subClassOf) | tanycyte (CL:0002085) | | ILC1, human (CL:0001077) | subClassOf (rdfs:subClassOf) | PR:000050567 | | tanycyte (CL:0002085) | BFO:0000050 | UBERON:0004670 | | neuromast supporting cell (CL:0000852) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | small intestine BEST4+ enterocyte (CL:4047051) | subClassOf (rdfs:subClassOf) | enterocyte of epithelium of small intestine (CL:1000334) | | squamous granulosa cell (CL:4033083) | RO:0002210 | cuboidal granulosa cell (CL:4033084) | | larval midgut cell (CL:0009003) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | neuronal-restricted precursor (CL:4042021) | BFO:0000050 | UBERON:0001017 | | cumulus cell (CL:0000711) | subClassOf (rdfs:subClassOf) | UBERON:0004120 | | inner cell mass cell (CL:2000020) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | oxytocin receptor sst GABAergic cortical interneuron (CL:4023122) | subClassOf (rdfs:subClassOf) | cerebral cortex GABAergic interneuron (CL:0010011) | | granulosa cell (CL:0000501) | RO:0002202 | pre-granulosa cell (CL:4033066) | | syncytial epithelial cell (CL:0000420) | subClassOf (rdfs:subClassOf) | syncytial cell (CL:4052002) | | eukaryotic cell (CL:0000255) | RO:0002162 | NCBITaxon:2759 | | gut absorptive cell (CL:0000677) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | common dendritic progenitor (CL:0001029) | subClassOf (rdfs:subClassOf) | PR:000050567 | | TCR-positive macrophage (CL:4030058) | subClassOf (rdfs:subClassOf) | PR:000050567 | | splenic red pulp macrophage (CL:0000874) | subClassOf (rdfs:subClassOf) | PR:000050567 | | cuboidal granulosa cell (CL:4033084) | subClassOf (rdfs:subClassOf) | UBERON:0004120 | | astrocyte-restricted precursor (CL:4042022) | RO:0002292 | PR:000001307 | | beta1-tanycyte (CL:4042019) | BFO:0000050 | UBERON:0006250 | | phagocyte (sensu Vertebrata) (CL:0000518) | RO:0002162 | NCBITaxon:7742 | | rosehip neuron (CL:0008032) | RO:0002162 | NCBITaxon:9606 | | malpighian tubule tip cell (CL:1000182) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | fungal cell (CL:0000521) | RO:0002162 | NCBITaxon:4751 | | striated cell of salivary gland (CL:4052049) | subClassOf (rdfs:subClassOf) | salivary gland glandular cell (CL:1001596) | | natural helper lymphocyte (CL:0002679) | subClassOf (rdfs:subClassOf) | PR:000050567 | | renal filtration cell (CL:0002522) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | alpha1-tanycyte (CL:4042017) | subClassOf (rdfs:subClassOf) | tanycyte (CL:0002085) | | vaginal lubricant secreting cell (CL:0000436) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | choroidal cell of the eye (CL:0000348) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | cardiocyte (CL:0002494) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | lung ciliated cell (CL:1000271) | subClassOf (rdfs:subClassOf) | epithelial cell of lung (CL:0000082) | | ependymal cell (CL:0000065) | RO:0002207 | radial glial cell (CL:0000681) | | cardioblast (sensu Arthropoda) (CL:0000465) | RO:0002162 | NCBITaxon:6656 | | intestinal villus capillary endothelial cell (CL:4052003) | subClassOf (rdfs:subClassOf) | capillary endothelial cell (CL:0002144) | | primitive erythroid progenitor (CL:0002361) | subClassOf (rdfs:subClassOf) | PR:000050567 | | ciliated cell (CL:0000064) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | multi-ciliated epithelial cell (CL:0005012) | BFO:0000051 | GO:0031514 | | CD7-negative lymphoid progenitor cell (CL:0001027) | subClassOf (rdfs:subClassOf) | PR:000050567 | | early colonocyte (CL:4047018) | subClassOf (rdfs:subClassOf) | early enterocyte (CL:4047019) | | GABAergic interneuron of the anterior substantia nigra pars reticulata (CL:4042026) | RO:0002292 | PR:000014898 | | squamous granulosa cell (CL:4033083) | RO:0002207 | pre-granulosa cell (CL:4033066) | | CD27-low, CD11b-high natural killer cell, mouse (CL:0002348) | subClassOf (rdfs:subClassOf) | PR:000050567 | | pre-natural killer cell (CL:0000937) | subClassOf (rdfs:subClassOf) | PR:000050567 | | multi-ciliated epithelial cell (CL:0005012) | subClassOf (rdfs:subClassOf) | columnar/cuboidal epithelial cell (CL:0000075) | | follicular cell of ovary (CL:0002174) | BFO:0000050 | UBERON:0001305 | | intercalated cell of salivary gland (CL:4052048) | subClassOf (rdfs:subClassOf) | duct epithelial cell (CL:0000068) | | scolopidial ligament cell (CL:0000407) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | BEST4+ enteroycte (CL:4030026) | RO:0002162 | NCBITaxon:9606 | | type A synovial cell (CL:0002302) | subClassOf (rdfs:subClassOf) | squamous epithelial cell (CL:0000076) | | alarm substance cell (CL:0007021) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | gingival epithelial cell (CL:0002621) | subClassOf (rdfs:subClassOf) | oral mucosa squamous cell (CL:1001576) | | CD34-positive, CD38-negative hematopoietic stem cell (CL:0001024) | subClassOf (rdfs:subClassOf) | PR:000050567 | | kidney cell (CL:1000497) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | squamous granulosa cell (CL:4033083) | subClassOf (rdfs:subClassOf) | granulosa cell (CL:0000501) | | DN4 thymocyte (CL:0000808) | subClassOf (rdfs:subClassOf) | PR:000050567 | | eye photoreceptor cell (CL:0000287) | subClassOf (rdfs:subClassOf) | neuronal receptor cell (CL:0000006) | | decidual natural killer cell, human (CL:0002343) | subClassOf (rdfs:subClassOf) | PR:000050567 | | dermal chromatophore (CL:4040006) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | beta2-tanycyte (CL:4042020) | RO:0002131 | UBERON:0002197 | | neuron associated cell (sensu Vertebrata) (CL:0000123) | RO:0002162 | NCBITaxon:7742 | | intestinal enteroendocrine progenitor (CL:4052006) | subClassOf (rdfs:subClassOf) | progenitor cell (CL:0011026) | | L5 non-Martinotti sst GABAergic interneuron (Mmus) (CL:4023028) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | group 2 innate lymphoid cell, mouse (CL:0002089) | subClassOf (rdfs:subClassOf) | PR:000050567 | | GABAergic interneuron of the anterior substantia nigra pars reticulata (CL:4042026) | RO:0002292 | PR:000007643 | | intestinal fibroblastic reticular cell (CL:4052004) | subClassOf (rdfs:subClassOf) | fibroblastic reticular cell (CL:0009101) | | beta1-tanycyte (CL:4042019) | subClassOf (rdfs:subClassOf) | astrocyte of the forebrain (CL:0012000) | | Peyer's patch follicular dendritic cell (CL:0009015) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | GABAergic interneuron of the posterior substantia nigra pars reticulata (CL:4042027) | subClassOf (rdfs:subClassOf) | neuron of the substantia nigra (CL:0002614) | | classical monocyte (CL:0000860) | subClassOf (rdfs:subClassOf) | PR:000050567 | | immature pericyte (CL:4047007) | subClassOf (rdfs:subClassOf) | pericyte (CL:0000669) | | granulocyte (CL:0000094) | subClassOf (rdfs:subClassOf) | PR:000050567 | | CD34-negative, CD41-positive, CD42-positive megakaryocyte cell (CL:0002026) | subClassOf (rdfs:subClassOf) | PR:000050567 | | ureteral cell (CL:1000601) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | crypt-bottom fibroblast (CL:4052008) | subClassOf (rdfs:subClassOf) | subepithelial intestinal fibroblast (CL:4052007) | | multinucleated giant cell (CL:0000647) | subClassOf (rdfs:subClassOf) | syncytial cell (CL:4052002) | | fetal derived definitive erythrocyte (CL:0002357) | subClassOf (rdfs:subClassOf) | PR:000050567 | | beta1-tanycyte (CL:4042019) | subClassOf (rdfs:subClassOf) | secretory cell (CL:0000151) | | angiogenic pericyte (CL:4047012) | subClassOf (rdfs:subClassOf) | pericyte (CL:0000669) | | type B synovial cell (CL:0002301) | subClassOf (rdfs:subClassOf) | squamous epithelial cell (CL:0000076) | | CD14-positive monocyte (CL:0001054) | subClassOf (rdfs:subClassOf) | PR:000050567 | | promonocyte (CL:0000559) | subClassOf (rdfs:subClassOf) | PR:000050567 | | hemocyte (sensu Arthropoda) (CL:0000387) | RO:0002162 | NCBITaxon:6656 | | striatal PTHLH MOXD1 expressing interneuron (CL:4042024) | RO:0002292 | PR:000010529 | | insulin secreting cell (CL:0000168) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | ganglion mother cell (CL:0000469) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | hematopoietic oligopotent progenitor cell (CL:0002032) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | L5 non-Martinotti sst GABAergic interneuron (Mmus) (CL:4023028) | subClassOf (rdfs:subClassOf) | cerebral cortex GABAergic interneuron (CL:0010011) | | mesodermal cell (CL:0000222) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | multinuclear osteoclast (CL:0000779) | subClassOf (rdfs:subClassOf) | syncytial cell (CL:4052002) | | striatal pthlh-expressing interneuron (CL:4042023) | RO:0002100 | UBERON:0002435 | | astrocyte-restricted precursor (CL:4042022) | subClassOf (rdfs:subClassOf) | neuron associated cell (sensu Vertebrata) (CL:0000123) | | alpha2-tanycyte (CL:4042018) | RO:0002131 | UBERON:0001932 | | pigment cell (sensu Vertebrata) (CL:0000342) | RO:0002162 | NCBITaxon:7742 | | non-classical monocyte (CL:0000875) | subClassOf (rdfs:subClassOf) | PR:000050567 | | ciliated cell (CL:0000064) | subClassOf (rdfs:subClassOf) | PR:000050567 | | multi-ciliated epithelial cell (CL:0005012) | RO:0000053 | PATO:0010007 | | angioblastic mesenchymal cell (CL:0000566) | subClassOf (rdfs:subClassOf) | PR:000050567 | | CD34-negative, CD117-positive innate lymphoid cell, human (CL:0001072) | subClassOf (rdfs:subClassOf) | PR:000050567 | | TAC3-positive medium spiny neuron (CL:4042002) | subClassOf (rdfs:subClassOf) | PR:000050567 | | neutrophilic myeloblast (CL:0000042) | subClassOf (rdfs:subClassOf) | PR:000050567 | | follicular cell of ovary (CL:0002174) | subClassOf (rdfs:subClassOf) | ovarian surface epithelial cell (CL:2000064) | | syncytial cell (CL:4052002) | RO:0002353 | GO:0000768 | | striated cell of salivary gland (CL:4052049) | BFO:0000050 | UBERON:0015766 | | intestinal villus capillary endothelial cell (CL:4052003) | subClassOf (rdfs:subClassOf) | fenestrated endothelial cell (CL:0000666) | | bone cell (CL:0001035) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | neural cell (CL:0002319) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | intercalated cell of salivary gland (CL:4052048) | BFO:0000050 | UBERON:0015766 | | pre-theca cell (CL:4052010) | subClassOf (rdfs:subClassOf) | stromal cell of ovary (CL:0002132) | | mesothelial cell (CL:0000077) | BFO:0000050 | UBERON:0001136 | | early T lineage precursor (CL:0002425) | subClassOf (rdfs:subClassOf) | PR:000050567 | | beta1-tanycyte (CL:4042019) | RO:0002131 | UBERON:0002197 | | intestinal enteroendocrine progenitor (CL:4052006) | BFO:0000050 | UBERON:0011184 | | crypt-top fibroblast (CL:4052009) | subClassOf (rdfs:subClassOf) | subepithelial intestinal fibroblast (CL:4052007) | | photoreceptor cell (CL:0000210) | subClassOf (rdfs:subClassOf) | visual system neuron (CL:0008028) | | multiciliated ependymal cell (CL:4052001) | BFO:0000050 | UBERON:0005357 | | Ly-76 high positive erythrocyte (CL:0002022) | subClassOf (rdfs:subClassOf) | PR:000050567 | | photoreceptor cell (CL:0000210) | RO:0002215 | GO:0050908 | | common myeloid progenitor, CD34-positive (CL:0001059) | subClassOf (rdfs:subClassOf) | PR:000050567 | | GABAergic interneuron of the posterior substantia nigra pars reticulata (CL:4042027) | RO:0002292 | PR:000001903 | | CD115-positive monocyte (CL:0001022) | subClassOf (rdfs:subClassOf) | PR:000050567 | | nephrocyte (CL:0002520) | RO:0002162 | NCBITaxon:50557 | | kidney loop of Henle short descending thin limb epithelial cell (CL:4030012) | subClassOf (rdfs:subClassOf) | squamous epithelial cell (CL:0000076) | | Kit-positive megakaryocyte progenitor cell (CL:0002024) | subClassOf (rdfs:subClassOf) | PR:000050567 | | L5/6 non-Martinotti sst GABAergic interneuron (Mmus) (CL:4023118) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | salivary gland cell (CL:0009005) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | basophil progenitor cell (CL:0000613) | subClassOf (rdfs:subClassOf) | PR:000050567 | | striated cell of salivary gland (CL:4052049) | BFO:0000050 | UBERON:0014729 | | beta2-tanycyte (CL:4042020) | subClassOf (rdfs:subClassOf) | astrocyte of the forebrain (CL:0012000) | | striatal pthlh-expressing interneuron (CL:4042023) | subClassOf (rdfs:subClassOf) | GABAergic interneuron (CL:0011005) | | CD34-positive, CD41-positive, CD42-negative megakaryocyte progenitor cell (CL:0002025) | subClassOf (rdfs:subClassOf) | PR:000050567 | | alpha2-tanycyte (CL:4042018) | RO:0002292 | PR:000014419 | | osteoclast (CL:0000092) | subClassOf (rdfs:subClassOf) | PR:000050567 | | syncytial cell (CL:4052002) | subClassOf (rdfs:subClassOf) | multinucleate cell (CL:0000228) | | alpha1-tanycyte (CL:4042017) | RO:0002292 | PR:000014419 | | beta2-tanycyte (CL:4042020) | BFO:0000050 | UBERON:0006250 | | neuroblast (sensu Nematoda and Protostomia) (CL:0000338) | RO:0002162 | NCBITaxon:33317 | | dendritic cell (CL:0000451) | subClassOf (rdfs:subClassOf) | PR:000050567 | | leucophore (CL:0000571) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | striatal pthlh-expressing interneuron (CL:4042023) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | scolopale cell (CL:0000382) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | mast cell (CL:0000097) | subClassOf (rdfs:subClassOf) | PR:000050567 | | sensory receptor cell (CL:0000197) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | myotube (CL:0002372) | subClassOf (rdfs:subClassOf) | syncytial cell (CL:4052002) | | polychromatophilic erythroblast (CL:0000550) | subClassOf (rdfs:subClassOf) | PR:000050567 | | adipose macrophage (CL:0002477) | subClassOf (rdfs:subClassOf) | PR:000050567 | | CD34-positive, CD38-positive megakaryocyte erythroid progenitor cell (CL:0002005) | subClassOf (rdfs:subClassOf) | PR:000050567 | | granulocyte monocyte progenitor cell (CL:0000557) | subClassOf (rdfs:subClassOf) | PR:000050567 | | endodermal cell (CL:0000223) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | smooth muscle cell derived foam cell (CL:0000892) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | L5/6 non-Martinotti sst GABAergic interneuron (Mmus) (CL:4023118) | subClassOf (rdfs:subClassOf) | cerebral cortex GABAergic interneuron (CL:0010011) | | fetal artery endothelial cell (CL:4047006) | subClassOf (rdfs:subClassOf) | endothelial cell of artery (CL:1000413) | | progenitor cell (CL:0011026) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | ooblast (CL:0002239) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | eosinophil progenitor cell (CL:0000611) | subClassOf (rdfs:subClassOf) | PR:000050567 | | CD27-high, CD11b-low natural killer cell, mouse (CL:0002349) | subClassOf (rdfs:subClassOf) | PR:000050567 | | syncytial cell (CL:4052002) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | neuroblast (sensu Vertebrata) (CL:0000031) | RO:0002162 | NCBITaxon:7742 | | animal zygote (CL:0000365) | RO:0002162 | NCBITaxon:33208 | | subepithelial intestinal fibroblast (CL:4052007) | RO:0002220 | UBERON:0001277 | | basophilic erythroblast (CL:0000549) | subClassOf (rdfs:subClassOf) | PR:000050567 | | early enterocyte (CL:4047019) | BFO:0000050 | UBERON:0013740 | | syncytiotrophoblast cell (CL:0000525) | subClassOf (rdfs:subClassOf) | syncytial cell (CL:4052002) | | micropylar cell (CL:0007022) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | pre-theca cell (CL:4052010) | BFO:0000050 | UBERON:0012186 | | striatal PTHLH MOXD1 expressing interneuron (CL:4042024) | subClassOf (rdfs:subClassOf) | striatal pthlh-expressing interneuron (CL:4042023) | | exocrine cell (CL:0000152) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | follicle associated enterocyte (CL:4052011) | subClassOf (rdfs:subClassOf) | enterocyte (CL:0000584) | | notochordal cell (CL:0007005) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | obliquely striated somatic muscle cell (CL:0008005) | subClassOf (rdfs:subClassOf) | single nucleate cell (CL:0000226) | | cnidocyte (CL:0011029) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | intercalated cell of salivary gland (CL:4052048) | BFO:0000050 | UBERON:0014727 | | L5 sst T-Martinotti interneuron (Mmus) (CL:4023027) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | early colonocyte (CL:4047018) | subClassOf (rdfs:subClassOf) | colonocyte (CL:1000347) | | striatal pthlh-expressing interneuron (CL:4042023) | RO:0002292 | PR:000013502 | | multiciliated ependymal cell (CL:4052001) | subClassOf (rdfs:subClassOf) | ependymal cell (CL:0000065) | | immature single positive thymocyte (CL:0000805) | subClassOf (rdfs:subClassOf) | PR:000050567 | | cell (CL:0000000) | RO:0002162 | NCBITaxon:131567 | | interstitial cell (CL:4030031) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | Schwann cell precursor (CL:0002375) | RO:0000053 | PATO:0001402 | | Schwann cell precursor (CL:0002375) | RO:0002387 | Schwann cell (CL:0002573) | | glomerular endothelial cell (CL:0002188) | subClassOf (rdfs:subClassOf) | PR:000050567 | | CD16-positive, CD56-dim natural killer cell, human (CL:0000939) | subClassOf (rdfs:subClassOf) | PR:000050567 | | cyanophore (CL:0000747) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | beta1-tanycyte (CL:4042019) | RO:0002292 | PR:000007489 | | multiciliated ependymal cell (CL:4052001) | subClassOf (rdfs:subClassOf) | multi-ciliated epithelial cell (CL:0005012) | | lymphocyte of B lineage, CD19-positive (CL:0001200) | subClassOf (rdfs:subClassOf) | PR:000050567 | | CD27-high, CD11b-high natural killer cell, mouse (CL:0002347) | subClassOf (rdfs:subClassOf) | PR:000050567 | | peritoneal macrophage (CL:0000581) | subClassOf (rdfs:subClassOf) | PR:000050567 | | perivascular macrophage (CL:0000881) | subClassOf (rdfs:subClassOf) | PR:000050567 | | DN1 thymic pro-T cell (CL:0000894) | subClassOf (rdfs:subClassOf) | PR:000050567 | | extraembryonic cell (CL:0000349) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | GlyA-positive erythrocyte (CL:0002021) | subClassOf (rdfs:subClassOf) | PR:000050567 | | squamous granulosa cell (CL:4033083) | BFO:0000050 | UBERON:0003981 | | intestinal villus capillary endothelial cell (CL:4052003) | BFO:0000050 | UBERON:0001213 | | hepatic stellate cell (CL:0000632) | subClassOf (rdfs:subClassOf) | PR:000050567 | | microglial cell (CL:0000129) | subClassOf (rdfs:subClassOf) | PR:000050567 | | pre-theca cell (CL:4052010) | RO:0002203 | theca cell (CL:0000503) | | mural granulosa cell (CL:4033067) | RO:0002202 | cuboidal granulosa cell (CL:4033084) | | L6 th sst GABAergic interneuron (Mmus) (CL:4023075) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | ependymal cell (CL:0000065) | BFO:0000050 | UBERON:0004670 | | neuroplacodal cell (CL:0000032) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | crypt-bottom fibroblast (CL:4052008) | RO:0002220 | UBERON:0013739 | | ependymal cell (CL:0000065) | subClassOf (rdfs:subClassOf) | glial cell (CL:0000125) | | CD25+ mast cell (CL:0011023) | subClassOf (rdfs:subClassOf) | PR:000050567 | | alpha2-tanycyte (CL:4042018) | subClassOf (rdfs:subClassOf) | tanycyte (CL:0002085) | | M cone cell (CL:0003049) | subClassOf (rdfs:subClassOf) | PR:000050567 | | epidermal cell (sensu Arthropoda) (CL:0000463) | RO:0002162 | NCBITaxon:6656 | | intercalated cell of salivary gland (CL:4052048) | subClassOf (rdfs:subClassOf) | salivary gland glandular cell (CL:1001596) | | crypt-bottom fibroblast (CL:4052008) | RO:0002220 | intestinal crypt stem cell (CL:0002250) | | primary spermatocyte (CL:0000656) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | myeloid cell (CL:0000763) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | erythroid progenitor cell, mammalian (CL:0001066) | subClassOf (rdfs:subClassOf) | PR:000050567 | | crypt-top fibroblast (CL:4052009) | RO:0002220 | UBERON:0013740 | | Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell (CL:0002006) | subClassOf (rdfs:subClassOf) | PR:000050567 | | Kit-positive macrophage dendritic cell progenitor (CL:0002011) | subClassOf (rdfs:subClassOf) | PR:000050567 | | promyelocyte (CL:0000836) | subClassOf (rdfs:subClassOf) | PR:000050567 | | primary neuron (sensu Teleostei) (CL:0000530) | RO:0002162 | NCBITaxon:32443 | | beta2-tanycyte (CL:4042020) | RO:0002292 | PR:000007489 | | alpha1-tanycyte (CL:4042017) | subClassOf (rdfs:subClassOf) | astrocyte of the forebrain (CL:0012000) | | L2/3/5 fan Martinotti sst GABAergic interneuron (Mmus) (CL:4023030) | subClassOf (rdfs:subClassOf) | cerebral cortex GABAergic interneuron (CL:0010011) | | astrocyte-restricted precursor (CL:4042022) | subClassOf (rdfs:subClassOf) | progenitor cell (CL:0011026) | | Dx5-negative, NK1.1-positive immature natural killer cell, mouse (CL:0002346) | subClassOf (rdfs:subClassOf) | PR:000050567 | | primitive red blood cell (CL:0002355) | subClassOf (rdfs:subClassOf) | PR:000050567 | | CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL:0001204) | RO:0002162 | NCBITaxon:9606 | | photoreceptor cell (CL:0000210) | subClassOf (rdfs:subClassOf) | sensory neuron (CL:0000101) | | ectodermal cell (CL:0000221) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | multinucleate cell (CL:0000228) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | yolk sac hematopoietic stem cell (CL:0002354) | subClassOf (rdfs:subClassOf) | PR:000050567 | | splenic metallophillic macrophage (CL:0000873) | subClassOf (rdfs:subClassOf) | PR:000050567 | | choroid plexus epithelial cell (CL:0000706) | RO:0002215 | GO:0033326 | | progesterone secreting cell (CL:0000179) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | GABAergic interneuron of the anterior substantia nigra pars reticulata (CL:4042026) | RO:0002292 | PR:000013047 | | striated cell of salivary gland (CL:4052049) | subClassOf (rdfs:subClassOf) | columnar/cuboidal epithelial cell (CL:0000075) | | secondary neuron (sensu Teleostei) (CL:0000535) | RO:0002162 | NCBITaxon:32443 | | hematopoietic multipotent progenitor cell (CL:0000837) | subClassOf (rdfs:subClassOf) | PR:000050567 | | pro-NK cell (CL:0000825) | subClassOf (rdfs:subClassOf) | PR:000050567 | | choroid plexus epithelial cell (CL:0000706) | BFO:0000050 | UBERON:0003911 | | alpha1-tanycyte (CL:4042017) | BFO:0000050 | UBERON:0004642 | | precementoblast (CL:0007002) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | neuron associated cell (sensu Nematoda and Protostomia) (CL:0000130) | RO:0002162 | NCBITaxon:33317 | | mast cell progenitor (CL:0000831) | subClassOf (rdfs:subClassOf) | PR:000050567 | | alveolar macrophage (CL:0000583) | subClassOf (rdfs:subClassOf) | PR:000050567 | | gamma-delta T cell (CL:0000798) | subClassOf (rdfs:subClassOf) | PR:000050567 | | mural granulosa cell (CL:4033067) | subClassOf (rdfs:subClassOf) | UBERON:0004120 | | TAC3-positive striatal interneuron (CL:4042001) | subClassOf (rdfs:subClassOf) | PR:000050567 | | substantia nigra dopaminergic neuron (CL:4042025) | subClassOf (rdfs:subClassOf) | midbrain dopaminergic neuron (CL:2000097) | | L4 sst Martinotti interneuron (Mmus) (CL:4023031) | subClassOf (rdfs:subClassOf) | cerebral cortex GABAergic interneuron (CL:0010011) | | hair follicle cell (CL:0002559) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | fetal liver hematopoietic progenitor cell (CL:0002353) | subClassOf (rdfs:subClassOf) | PR:000050567 | | splenic marginal zone macrophage (CL:0000872) | subClassOf (rdfs:subClassOf) | PR:000050567 | | follicle cell of egg chamber (CL:0000477) | RO:0002162 | NCBITaxon:50557 | | hematopoietic multipotent progenitor cell (CL:0000837) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | parafollicular cell (CL:0000570) | subClassOf (rdfs:subClassOf) | PR:000050567 | | BEST4+ colonocyte (CL:4047052) | subClassOf (rdfs:subClassOf) | colonocyte (CL:1000347) | | fetal vein endothelial cell (CL:4047011) | subClassOf (rdfs:subClassOf) | vein endothelial cell (CL:0002543) | | stratified cuboidal epithelial cell (CL:0000241) | BFO:0000050 | UBERON:0010077 | | peripheral blood mesothelial cell (CL:0002318) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | Kit-positive, Sca1-positive common lymphoid progenitor (CL:0001025) | subClassOf (rdfs:subClassOf) | PR:000050567 | | splenic white pulp macrophage (CL:0000876) | subClassOf (rdfs:subClassOf) | PR:000050567 | | L cone cell (CL:0003048) | subClassOf (rdfs:subClassOf) | PR:000050567 | | secondary spermatocyte (CL:0000657) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | CD8-positive, alpha-beta memory T cell, CD45RO-positive (CL:0001203) | RO:0002162 | NCBITaxon:9606 | | oxytocin receptor sst GABAergic cortical interneuron (CL:4023122) | RO:0002292 | PR:000015665 | | BEST4+ colonocyte (CL:4047052) | subClassOf (rdfs:subClassOf) | BEST4+ enteroycte (CL:4030026) | | pro-B cell (CL:0000826) | subClassOf (rdfs:subClassOf) | PR:000050567 | | GABAergic interneuron of the anterior substantia nigra pars reticulata (CL:4042026) | subClassOf (rdfs:subClassOf) | neuron of the substantia nigra (CL:0002614) | | BEST4+ enteroycte (CL:4030026) | subClassOf (rdfs:subClassOf) | enterocyte (CL:0000584) | | oenocyte (CL:0000487) | RO:0002162 | NCBITaxon:6656 | | stratified squamous epithelial cell (CL:0000240) | BFO:0000050 | UBERON:0006915 |
</details>
<details> <summary>Relationships removed: 114</summary>
| Subject| Predicate| Object| ----|----|----| | lower urinary tract cell (CL:1000600) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | mural granulosa cell (CL:4033067) | RO:0002207 | granulosa cell (CL:0000501) | | neuron associated cell (sensu Nematoda and Protostomia) (CL:0000130) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | pvalb GABAergic cortical interneuron (CL:4023018) | subClassOf (rdfs:subClassOf) | cerebral cortex GABAergic interneuron (CL:0010011) | | transit amplifying cell (CL:0009010) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | cell (CL:0000000) | RO:0002160 | NCBITaxon:131567 | | follicle stem cell (sensu Arthropoda) (CL:0000441) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | rosehip neuron (CL:0008032) | RO:0002160 | NCBITaxon:9606 | | adepithelial cell (CL:0000462) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | secondary neuron (sensu Teleostei) (CL:0000535) | RO:0002160 | NCBITaxon:32443 | | neuroblast (sensu Nematoda and Protostomia) (CL:0000338) | RO:0002160 | NCBITaxon:33317 | | mural granulosa cell (CL:4033067) | subClassOf (rdfs:subClassOf) | ovarian surface epithelial cell (CL:2000064) | | rosehip neuron (CL:0008032) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | gut absorptive cell (CL:0000677) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | oocyte (CL:0000023) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | Schwann cell precursor (CL:0002375) | subClassOf (rdfs:subClassOf) | glioblast (CL:0000030) | | sst GABAergic cortical interneuron (CL:4023017) | subClassOf (rdfs:subClassOf) | cerebral cortex GABAergic interneuron (CL:0010011) | | epidermal cell (sensu Arthropoda) (CL:0000463) | RO:0002160 | NCBITaxon:6656 | | notochordal cell (CL:0007005) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | cardioblast (sensu Arthropoda) (CL:0000465) | RO:0002160 | NCBITaxon:6656 | | histoblast (CL:0000373) | RO:0002160 | NCBITaxon:50557 | | neural cell (CL:0002319) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | oenocyte (CL:0000487) | RO:0002160 | NCBITaxon:6656 | | pigment cell (sensu Vertebrata) (CL:0000342) | RO:0002160 | NCBITaxon:7742 | | larval midgut cell (CL:0009003) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | bone cell (CL:0001035) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | neuron associated cell (sensu Nematoda and Protostomia) (CL:0000130) | RO:0002160 | NCBITaxon:33317 | | kidney cell (CL:1000497) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | pulmonary alveolar epithelial cell (CL:0000322) | subClassOf (rdfs:subClassOf) | obsolete epithelial cell of alveolus of lung (CL:0010003) | | obsolete epithelial cell of alveolus of lung (CL:0010003) | subClassOf (rdfs:subClassOf) | epithelial cell (CL:0000066) | | follicle stem cell (sensu Arthropoda) (CL:0000441) | RO:0002160 | NCBITaxon:6656 | | imaginal disc cell (CL:0000429) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | histoblast (CL:0000373) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | L5 non-Martinotti sst GABAergic interneuron (Mmus) (CL:4023028) | subClassOf (rdfs:subClassOf) | sst GABAergic cortical interneuron (CL:4023017) | | salivary gland cell (CL:0009005) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | obliquely striated somatic muscle cell (CL:0008005) | subClassOf (rdfs:subClassOf) | multinucleate cell (CL:0000228) | | photoreceptor cell (CL:0000210) | subClassOf (rdfs:subClassOf) | neuronal receptor cell (CL:0000006) | | neuron associated cell (sensu Vertebrata) (CL:0000123) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | rod bipolar cell (CL:0000751) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | follicle cell of egg chamber (CL:0000477) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | primary neuron (sensu Teleostei) (CL:0000530) | RO:0002160 | NCBITaxon:32443 | | oxytocin receptor sst GABAergic cortical interneuron (CL:4023122) | subClassOf (rdfs:subClassOf) | sst GABAergic cortical interneuron (CL:4023017) | | extraembryonic cell (CL:0000349) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | Lamp5 Lhx6 neuron (CL:4042013) | subClassOf (rdfs:subClassOf) | lamp5 GABAergic cortical interneuron (CL:4023011) | | sst GABAergic cortical interneuron (CL:4023017) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | secondary neuron (sensu Teleostei) (CL:0000535) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | BEST4+ enteroycte (CL:4030026) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | pvalb GABAergic cortical interneuron (CL:4023018) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | cardioblast (sensu Arthropoda) (CL:0000465) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | neuroblast (sensu Vertebrata) (CL:0000031) | RO:0002160 | NCBITaxon:7742 | | gingival epithelial cell (CL:0002621) | subClassOf (rdfs:subClassOf) | epithelial cell of alimentary canal (CL:0002251) | | memory CCR4-positive regulatory T cell (CL:0001046) | RO:0002160 | NCBITaxon:9606 | | fungal cell (CL:0000521) | RO:0002160 | NCBITaxon:4751 | | Eumycetozoan cell (CL:0000257) | RO:0002160 | NCBITaxon:142796 | | flask cell (CL:0007023) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | sebaceous gland cell (CL:2000021) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | BEST4+ enteroycte (CL:4030026) | RO:0002160 | NCBITaxon:9606 | | nephrocyte (CL:0002520) | RO:0002160 | NCBITaxon:50557 | | ureteral cell (CL:1000601) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | L6 th sst GABAergic interneuron (Mmus) (CL:4023075) | subClassOf (rdfs:subClassOf) | sst GABAergic cortical interneuron (CL:4023017) | | epidermal cell (sensu Arthropoda) (CL:0000463) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | syncytiotrophoblast cell (CL:0000525) | subClassOf (rdfs:subClassOf) | multinucleate cell (CL:0000228) | | multinucleated giant cell (CL:0000647) | subClassOf (rdfs:subClassOf) | multinucleate cell (CL:0000228) | | mural granulosa cell (CL:4033067) | subClassOf (rdfs:subClassOf) | follicular cell of ovary (CL:0002174) | | interstitial cell (CL:4030031) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | cystoblast (CL:0000722) | RO:0002160 | NCBITaxon:6656 | | rod bipolar cell (CL:0000751) | RO:0002160 | NCBITaxon:40674 | | L5/6 non-Martinotti sst GABAergic interneuron (Mmus) (CL:4023118) | subClassOf (rdfs:subClassOf) | sst GABAergic cortical interneuron (CL:4023017) | | nephrocyte (CL:0002520) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | leukocyte (CL:0000738) | RO:0002160 | NCBITaxon:7742 | | L2/3/5 fan Martinotti sst GABAergic interneuron (Mmus) (CL:4023030) | subClassOf (rdfs:subClassOf) | sst GABAergic cortical interneuron (CL:4023017) | | L5 sst T-Martinotti interneuron (Mmus) (CL:4023027) | subClassOf (rdfs:subClassOf) | sst GABAergic cortical interneuron (CL:4023017) | | inner cell mass cell (CL:2000020) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | circulating cell (CL:0000080) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | CD8-positive, alpha-beta memory T cell, CD45RO-positive (CL:0001203) | RO:0002160 | NCBITaxon:9606 | | hair follicle cell (CL:0002559) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | eukaryotic cell (CL:0000255) | RO:0002160 | NCBITaxon:2759 | | oocyte (CL:0000023) | RO:0002160 | NCBITaxon:33208 | | imaginal disc cell (CL:0000429) | RO:0002160 | NCBITaxon:50557 | | choroid plexus epithelial cell (CL:0000706) | BFO:0000050 | UBERON:0001886 | | cumulus cell (CL:0000711) | RO:0002202 | granulosa cell (CL:0000501) | | BEST4+ enteroycte (CL:4030026) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | obsolete epithelial cell of alveolus of lung (CL:0010003) | BFO:0000050 | UBERON:0002299 | | follicle cell of egg chamber (CL:0000477) | RO:0002160 | NCBITaxon:50557 | | cardiocyte (CL:0002494) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL:0001204) | RO:0002160 | NCBITaxon:9606 | | photoreceptor cell (CL:0000210) | RO:0002215 | GO:0050962 | | neuron associated cell (sensu Vertebrata) (CL:0000123) | RO:0002160 | NCBITaxon:7742 | | choroid plexus epithelial cell (CL:0000706) | subClassOf (rdfs:subClassOf) | neural cell (CL:0002319) | | cell of skeletal muscle (CL:0000188) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | phagocyte (sensu Vertebrata) (CL:0000518) | RO:0002160 | NCBITaxon:7742 | | syncytial epithelial cell (CL:0000420) | subClassOf (rdfs:subClassOf) | multinucleate cell (CL:0000228) | | primary neuron (sensu Teleostei) (CL:0000530) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | cumulus cell (CL:0000711) | subClassOf (rdfs:subClassOf) | follicular cell of ovary (CL:0002174) | | ciliated columnar cell of tracheobronchial tree (CL:0002145) | BFO:0000051 | GO:0031514 | | neuroglioblast (sensu Nematoda and Protostomia) (CL:0000468) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | micropylar cell (CL:0007022) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | sensory receptor cell (CL:0000197) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | neuroglioblast (sensu Nematoda and Protostomia) (CL:0000468) | RO:0002160 | NCBITaxon:33317 | | blood vessel endothelial cell (CL:0000071) | RO:0002202 | embryonic blood vessel endothelial progenitor cell (CL:0002546) | | epithelial cell (CL:0000066) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | L4 sst Martinotti interneuron (Mmus) (CL:4023031) | subClassOf (rdfs:subClassOf) | sst GABAergic cortical interneuron (CL:4023017) | | BEST4+ enteroycte (CL:4030026) | subClassOf (rdfs:subClassOf) | gut absorptive cell (CL:0000677) | | animal zygote (CL:0000365) | RO:0002160 | NCBITaxon:33208 | | pre-granulosa cell (CL:4033066) | RO:0002210 | granulosa cell (CL:0000501) | | granulosa cell (CL:0000501) | RO:0002207 | pre-granulosa cell (CL:4033066) | | connective tissue cell (CL:0002320) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | myotube (CL:0002372) | subClassOf (rdfs:subClassOf) | multinucleate cell (CL:0000228) | | hemocyte (sensu Arthropoda) (CL:0000387) | RO:0002160 | NCBITaxon:6656 | | adepithelial cell (CL:0000462) | RO:0002160 | NCBITaxon:50557 | | neuroblast (sensu Nematoda and Protostomia) (CL:0000338) | subClassOf (rdfs:subClassOf) | eukaryotic cell (CL:0000255) | | rod bipolar cell (CL:0000751) | subClassOf (rdfs:subClassOf) | BFO:0000002 | | ciliated cell (CL:0000064) | subClassOf (rdfs:subClassOf) | cell (CL:0000000) | | lung ciliated cell (CL:1000271) | BFO:0000050 | UBERON:0002048 |
</details>
<details> <summary>Mappings added: 74</summary>
| Subject | Predicate | Object | ----|----|----| | glomerular capillary endothelial cell (CL:1001005) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1001005 | | cholangiocyte (CL:1000488) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1000488 | | kidney collecting duct principal cell (CL:1001431) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1001431 | | mononuclear phagocyte (CL:0000113) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000113 | | lung neuroendocrine cell (CL:1000223) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1000223 | | intestinal crypt stem cell of colon (CL:0009043) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0009043 | | ionocyte (CL:0005006) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0005006 | | endothelial cell of umbilical vein (CL:0002618) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002618 | | vasa recta descending limb cell (CL:1001285) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1001285 | | pigmented ciliary epithelial cell (CL:0002303) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002303 | | goblet cell (CL:0000160) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000160 | | intestinal crypt stem cell (CL:0002250) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002250 | | endothelial stalk cell (CL:0002671) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002671 | | chromaffin cell (CL:0000166) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000166 | | intestinal crypt stem cell of small intestine (CL:0009017) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0009017 | | glial cell (CL:0000125) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000125 | | renal alpha-intercalated cell (CL:0005011) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0005011 | | retinal blood vessel endothelial cell (CL:0002585) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002585 | | renal principal cell (CL:0005009) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0005009 | | pulmonary alveolar epithelial cell (CL:0000322) | oio:hasDbXref | MESH:D056809 | | alternatively activated macrophage (CL:0000890) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000890 | | Kupffer cell (CL:0000091) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000091 | | syncytial epithelial cell (CL:0000420) | oio:hasDbXref | Wikipedia:Syncytium | | hepatoblast (CL:0005026) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0005026 | | Leydig cell (CL:0000178) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000178 | | pancreatic epsilon cell (CL:0005019) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0005019 | | seminal vesicle glandular cell (CL:1001597) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1001597 | | enterocyte of epithelium of small intestine (CL:1000334) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1000334 | | endothelial cell of artery (CL:1000413) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1000413 | | multi-ciliated epithelial cell (CL:0005012) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0005012 | | M cell of gut (CL:0000682) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000682 | | podocyte (CL:0000653) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000653 | | Purkinje cell (CL:0000121) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000121 | | secondary lens fiber (CL:0002225) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002225 | | pancreatic acinar cell (CL:0002064) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002064 | | lung goblet cell (CL:1000143) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1000143 | | Schwann cell (CL:0002573) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002573 | | PP cell (CL:0000696) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000696 | | urothelial cell (CL:0000731) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000731 | | intrahepatic cholangiocyte (CL:0002538) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002538 | | kidney afferent arteriole endothelial cell (CL:1001096) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1001096 | | epithelial cell of lacrimal sac (CL:1000436) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1000436 | | basal epithelial cell of tracheobronchial tree (CL:0002329) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002329 | | mesenchymal stem cell of adipose tissue (CL:0002570) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002570 | | acinar cell (CL:0000622) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000622 | | renal intercalated cell (CL:0005010) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0005010 | | brush cell (CL:0002204) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002204 | | granulosa cell (CL:0000501) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000501 | | respiratory basal cell (CL:0002633) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002633 | | type A enteroendocrine cell (CL:0002067) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002067 | | mesothelial cell of pleura (CL:1000491) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1000491 | | fenestrated endothelial cell (CL:0000666) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000666 | | pulmonary ionocyte (CL:0017000) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0017000 | | mesothelial cell of visceral pleura (CL:1000493) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1000493 | | kidney collecting duct epithelial cell (CL:1000454) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1000454 | | vein endothelial cell (CL:0002543) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002543 | | respiratory goblet cell (CL:0002370) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002370 | | retinal pigment epithelial cell (CL:0002586) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002586 | | kidney efferent arteriole endothelial cell (CL:1001099) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1001099 | | hepatocyte (CL:0000182) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000182 | | inflammatory macrophage (CL:0000863) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000863 | | alveolar macrophage (CL:0000583) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000583 | | neural crest cell (CL:0011012) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0011012 | | type EC enteroendocrine cell (CL:0000577) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000577 | | ciliated columnar cell of tracheobronchial tree (CL:0002145) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002145 | | type D enteroendocrine cell (CL:0000502) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000502 | | enteroendocrine cell (CL:0000164) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000164 | | pancreatic PP cell (CL:0002275) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0002275 | | enterocyte of epithelium proper of ileum (CL:1000342) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1000342 | | paneth cell (CL:0000510) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000510 | | vasa recta ascending limb cell (CL:1001131) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1001131 | | hypendymal cell (CL:4023181) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_4023181 | | colonocyte (CL:1000347) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_1000347 | | classical monocyte (CL:0000860) | oio:hasDbXref | https://cellxgene.cziscience.com/cellguide/CL_0000860 |
</details>
<details> <summary>Text definitions changed: 48</summary>
| Term | Old Text Definition | New Text Definition | ----|----|----| | lamp5 GABAergic cortical interneuron (CL:4023011) | A GABAergic neuron located in the cerebral cortex that expresses Lamp5 | A transcriptomically distinct GABAergic neuron located in the cerebral cortex that expresses Lamp5. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: CGE-derived interneurons', Author Categories: 'CrossArea_subclass', clusters Lamp5. | | fallopian tube secretory epithelial cell (CL:4030006) | An epithelial cell that is part of the fallopian tube epithelium that secretes mucous fluid and oviduct-specific products through the stimulation of estrogen and luteinizing hormone. The fallopian tube secretory cell has approximately the same height as the ciliated cell and is usually a more narrow columnar cell. The nucleus is ovoid and perpendicular to the long axis of the cell. The chromatin is more dense and the nucleolus smaller than that seen in the ciliated cell. | An epithelial cell that is part of the fallopian tube epithelium that secretes mucous fluid and oviduct-specific products through the stimulation of estrogen and luteinizing hormone. The fallopian tube secretory cell has approximately the same height as the ciliated cell and is usually a more narrow columnar cell. The nucleus is ovoid and perpendicular to the long axis of the cell. The chromatin is more dense and the nucleolus smaller than that seen in the ciliated cell. | | cerebral cortex endothelial cell (CL:1001602) | Endothelial cells forming the walls of the capillaries within the cerebral cortex. | A distinct endothelial cell forming the walls of the capillaries within the cerebral cortex. | | astrocyte of the cerebral cortex (CL:0002605) | An astrocyte of the cerebral cortex. | A transcriptomically distinct astrocyte that is found in the cerebral cortex. | | fungal cell (CL:0000521) | Any cell that only exists in Fungi. | Any cell that in taxon some Fungi. | | VIP GABAergic cortical interneuron (CL:4023016) | A GABAergic neuron located in the cerebral cortex that expresses vasoactive intestinal polypeptide | A transcriptomically distinct cortical GABAergic neuron that expresses the vasocactive intestinal polypeptide and that has its soma located in the cerebral cortex. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: CGE-derived interneurons', Author Categories: 'CrossArea_subclass', cluster Vip. | | CD1c-positive myeloid dendritic cell (CL:0002399) | A myeloid dendritic cell found in the blood that is CD1c-positive. | A myeloid dendritic cell that is CD1c-positive. | | squamous endothelial cell of venule (CL:0008040) | An endothelial cell of the venule that is squamous shaped. This is in contrast to the cubodial shape of high endothelial venule cells. | An endothelial cell of the venule that is squamous shaped. This is in contrast to the cubodial shape of high endothelial venule cells. | | Eumycetozoan cell (CL:0000257) | Any cell that only exists in Eumycetozoa. | Any cell that in taxon some Eumycetozoa. | | type B synovial cell (CL:0002301) | A resident stromal cell located in the synovial membrane and responsible for the production of immune-related cytokines and chemokines. This cell type secretes glycoproteins and hyaluronic acid, has abundant granular endoplasmic reticulum, but contains fewer vacuoles and vesicles. | A resident stromal cell located in the synovial membrane and responsible for the production of immune-related cytokines and chemokines. This cell type secretes glycoproteins and hyaluronic acid, has abundant granular endoplasmic reticulum, but contains fewer vacuoles and vesicles. | | kidney collecting duct alpha-intercalated cell (CL:4030015) | A renal alpha-intercalated cell that is part of the collecting duct of the renal tubule. | A renal alpha-intercalated cell that is part of the collecting duct of the renal tubule. | | fallopian tube ciliated cell (CL:4030007) | An epithelial ciliated cell that is part of the fallopian tube. This cell type is found mainly on the apex of the mucosal folds and contributes, together with peristaltic contractions, to the self-propulsion of spermatozoa, the transport of ovum during ovulation and the transport of the fertilized ovum to the intramural fallopian tube. A fallopian tube ciliated cell has a columnar shape and contains an oval or round nucleus, often located perpendicular or parallel to the long axis of the cell. | An epithelial ciliated cell that is part of the fallopian tube. This cell type is found mainly on the apex of the mucosal folds and contributes, together with peristaltic contractions, to the self-propulsion of spermatozoa, the transport of ovum during ovulation and the transport of the fertilized ovum to the intramural fallopian tube. A fallopian tube ciliated cell has a columnar shape and contains an oval or round nucleus, often located perpendicular or parallel to the long axis of the cell. | | BEST4+ enteroycte (CL:4030026) | An absorptive epithelial cell of the human intestine expressing bestrophin-4 (BEST4) calcium-activated ion channels. | An enterocyte of the human intestine expressing bestrophin-4 (BEST4) calcium-activated ion channels. | | chandelier pvalb GABAergic cortical interneuron (CL:4023036) | A pvalb GABAergic cortical interneuron that is recognizable by the straight terminal axonal 'cartridges' of vertically oriented strings of synaptic boutons. Chandelier PV cells' boutons target exclusively the axon initial segment (AIS) of pyramidal cells, with a single cell innervating hundreds of pyramidal cells in a clustered manner. | A transcriptomically distinct pvalb GABAergic cortical interneuron that is recognizable by the straight terminal axonal 'cartridges' of vertically oriented strings of synaptic boutons. Chandelier PV cells' boutons target exclusively the axon initial segment (AIS) of pyramidal cells, with a single cell innervating hundreds of pyramidal cells in a clustered manner. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: CGE-derived interneurons', Author Categories: 'CrossArea_subclass', clusters Chandelier. | | choroid plexus epithelial cell (CL:0000706) | Specialized ependymal cell that produces the cerebrospinal fluid from the blood and secretes it into the lumen of the brain and spinal chord. | A specialized ependymal cell that is part of the choroid plexus epithelium, responsible for producing cerebrospinal fluid (CSF) by selectively filtering and modifying blood plasma components before secreting it into the brain and spinal cord. This cell is characterized by a brush border on its apical surface, which enhances the secretion of CSF. | | vascular leptomeningeal cell (CL:4023051) | A type of mesothelial fibroblast that is derived from the neural crest, is localized on blood vessels, and is a key component of the pia and arachnoid membranes surrounding the brain. | A transcriptomically distinct type of mesothelial fibroblast that is derived from the neural crest, is localized on blood vessels, and is a key component of the pia and arachnoid membranes surrounding the brain. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: Non-neuronal cells', Author Categories: 'CrossArea_subclass', clusters VLMC. | | thymic nurse cell (CL:4030004) | A large epithelial cell found in the thymus. This cell type may internalize thymocytes through extensions of plasma membrane. The cell surface and cytoplasmic vacuoles of a thymic nurse cell express MHC Class I and MHC Class II antigens. The interaction of these antigens with a developing thymocyte determines whether the thymocyte undergoes positive or negative selection. | A large epithelial cell found in the thymus. This cell type may internalize thymocytes through extensions of plasma membrane. The cell surface and cytoplasmic vacuoles of a thymic nurse cell express MHC Class I and MHC Class II antigens. The interaction of these antigens with a developing thymocyte determines whether the thymocyte undergoes positive or negative selection. | | tanycyte (CL:0002085) | Specialized elongated ventricular ependymal cell that has processes that extend to the outer, or pial, surface of the CNS. Resemble spongioblasts seen in developing brain. Found in the adult brain in the third ventricle, cerebral aqueduct, spinal canal and floor of the fourth ventricle. | A specialized elongated ventricular ependymal cell that has processes that extend to the outer, or pial, surface of the CNS. A tanycyte is found in the adult brain, specifically in the third ventricle, cerebral aqueduct, spinal canal, and floor of the fourth ventricle. This cell type is involved in hormonal regulation, gatekeeping molecules between the bloodstream and cerebrospinal fluid, metabolic sensing, and regulating food intake. | | myotube (CL:0002372) | A transversely striated, synctial muscle cell, formed by the fusion of myoblasts. | A transversely striated, multinucleated syncytial muscle cell, formed by the fusion of myoblasts during muscle development. | | glycinergic amacrine cell (CL:4030028) | An amacrine cell that uses glycine as a neurotransmitter. | An amacrine cell that uses glycine as a neurotransmitter. | | lung ciliated cell (CL:1000271) | Any ciliated cell that is part of some lung. | An epithelial cell that is part of the lung epithelium. This cell is characterised by the presence of cilia on its apical surface. | | obsolete epithelial cell of alveolus of lung (CL:0010003) | An epithelial cell that is part_of a alveolus of lung. | OBSOLETE. An epithelial cell that is part_of a alveolus of lung. | | eukaryotic cell (CL:0000255) | Any cell that only exists in Eukaryota. | Any cell that in taxon some Eukaryota. | | photoreceptor cell (CL:0000210) | A cell specialized to detect and transduce light. | A cell specialized in detecting light stimuli that are involved in visual perception. | | kidney loop of Henle short descending thin limb epithelial cell (CL:4030012) | Epithelial cell of the descending thin limb of the short loop (cortical) nephron limited to the outer medulla (mainly inner strip). It is known in some mammalian species that the short descending limb of the loop of Henle selectively expresses the serine protease Corin, the homeobox TF Uncx, and the urea channel Slc14a2. | Epithelial cell of the descending thin limb of the short loop (cortical) nephron limited to the outer medulla (mainly inner strip). It is known in some mammalian species that the short descending limb of the loop of Henle selectively expresses the serine protease Corin, the homeobox TF Uncx, and the urea channel Slc14a2. | | L5/6 near-projecting glutamatergic neuron of the primary motor cortex (CL:4023043) | A near-projecting glutamatergic neuron with a soma found in layer 5/6 of the primary motor cortex. | A transcriptomically distinct near-projecting glutamatergic neuron with a soma found in layer 5/6 of the primary motor cortex. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: Deep layer (non-IT) excitatory neurons', Author Categories: 'CrossArea_subclass', cluster L5/6 NP. | | Schwann cell precursor (CL:0002375) | A glioblast cell that develops from a migratory neural crest cell. The SCP is embedded among neurons (axons) with minimal extracellular spaces separating them from nerve cell membranes and has no basal lamina. In rodents SCPs are the only cells in the Schwann cell linage that expresses Cdh19. | A multipotent progenitor cell that develops from a migratory neural crest cell. The schwann cell precursor is embedded among axons, with minimal extracellular space separating them from nerve cell membranes. This cell lacks a basal lamina, which distinguishes it from more mature Schwann cells. In rodents, cadherin-19 (Cdh19) serves as a specific marker for this developmental stage. | | sst chodl GABAergic cortical interneuron (CL:4023121) | A sst GABAergic cortical interneuron that also expresses Chodl. These neurons are rare and correspond to the only known cortical interneurons with long-range projection. | A transcriptomically distinct sst GABAergic cortical interneuron that also expresses Chodl. These neurons are rare and correspond to the only known cortical interneurons with long-range projection. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: MGE-derived interneurons', Author Categories: 'CrossArea_subclass', clusters Sst Chodl. | | pronephric podocyte (CL:4030008) | A specialized epithelial cell that contains "feet" that interdigitate with the "feet" of other glomerular epithelial cells in the pronephros. | A specialized epithelial cell that contains "feet" that interdigitate with the "feet" of other glomerular epithelial cells in the pronephros. | | multinucleate cell (CL:0000228) | A cell with more than one nucleus. | A cell with more than one nucleus. | | pvalb GABAergic cortical interneuron (CL:4023018) | A GABAergic interneuron located in the cerebral cortex that expresses Parvalbumin. | A transcriptomically distinct GABAergic interneuron with a soma located in a cerebral cortex and it expresses Parvalbumin. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: MGE-derived interneurons', Author Categories: 'CrossArea_subclass', cluster Pvalb. | | microglial cell (CL:0000129) | A central nervous system macrophage found in the parenchyma of the central nervous system. Marker include CD11b-positive, F4/80-positive, and CD68-positive. | A transcriptomically distinct central nervous system macrophage found in the parenchyma of the central nervous system. Marker include CD11b-positive, F4/80-positive, and CD68-positive. | | obliquely striated somatic muscle cell (CL:0008005) | A somatic muscle cell that is oblquely striated. Examples include the somatic muscles of nematodes. | A somatic muscle cell that is obliquely striated and mononucleated. Examples include the somatic muscles of nematodes. | | perineurial cell (CL:0002576) | A glial cell that is part of the perineurium. This cell type has thin long bipolar cytoplasmic processes, pinocytotic vesicles, fragments of external lamina and/or external lamina-like material, attachment plaques, and desmosome-like junctions. Perineurial cells historically have been referred to as fibroblasts because of shape; however, unlike fibroblasts, a perineurial cell: does not have a compact nucleus and large endoplasmic reticulum; does have a double basement membrane opposed to a single basal lamina; is carefully joined to other perineurial cells by tight junctions into a single sheet as opposed to arranged in a large mass; and finally, can surround a small axon bundle at a nerve terminal whereas a fibroblast cannot. | A glial cell that is part of the perineurium. This cell type has thin long bipolar cytoplasmic processes, pinocytotic vesicles, fragments of external lamina and/or external lamina-like material, attachment plaques, and desmosome-like junctions. Perineurial cells historically have been referred to as fibroblasts because of shape; however, unlike fibroblasts, a perineurial cell: does not have a compact nucleus and large endoplasmic reticulum; does have a double basement membrane opposed to a single basal lamina; is carefully joined to other perineurial cells by tight junctions into a single sheet as opposed to arranged in a large mass; and finally, can surround a small axon bundle at a nerve terminal whereas a fibroblast cannot. | | mural granulosa cell (CL:4033067) | A follicular cell of ovary that differentiates from a granulosa cell during the secondary follicle stage. Mural granulosa cells line the inner surface of the follicle wall, surrounding the fluid-filled antral cavity. These cells produce oestrogen during the follicular phase in response to follicle-stimulating hormone (FSH), and progesterone after ovulation in response to luteinizing hormone (LH). | A follicular cell of ovary that differentiates from a cuboidal granulosa cell during the secondary follicle stage. Mural granulosa cells line the inner surface of the follicle wall, surrounding the fluid-filled antral cavity. These cells produce oestrogen during the follicular phase in response to follicle-stimulating hormone (FSH), and progesterone after ovulation in response to luteinizing hormone (LH). | | sncg GABAergic cortical interneuron (CL:4023015) | A GABAergic neuron located in the cerebral cortex that expresses Gamma-synuclein | A transcriptomically distinct GABAergic neuron located in the cerebral cortex that expresses Gamma-synuclein. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: CGE-derived interneurons', Author Categories: 'CrossArea_subclass', clusters Sncg. | | mesonephric podocyte (CL:0002523) | A specialized epithelial cell that contains "feet" that interdigitate with the "feet" of other glomerular epithelial cells in the mesonephros. | A specialized epithelial cell that contains "feet" that interdigitate with the "feet" of other glomerular epithelial cells in the mesonephros. | | multi-ciliated epithelial cell (CL:0005012) | A ciliated epithelial cell with many cilia. | A columnar/cuboidal epithelial cell with multiple motile cilia on its apical surface. These cells facilitate the movement of liquids such as mucus or cerebrospinal fluid across the epithelial surface. | | sst GABAergic cortical interneuron (CL:4023017) | A GABAergic neuron located in the cerebral cortex that expresses somatostatin (sst) | A transcriptomically distinct GABAergic neuron located in the cerebral cortex that expresses somatostatin (sst). The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: MGE-derived interneurons', Author Categories: 'CrossArea_subclass', cluster Sst. | | L6b glutamatergic cortical neuron (CL:4023038) | A glutamatergic neuron with a soma found in cortical layer 6b. They are transcriptomically related to corticothalamic-projecting neurons but have differential projections to the thalamus or anterior cingulate. | A glutamatergic neuron with a soma found in cortical layer 6b. They are transcriptomically related to corticothalamic-projecting neurons but have differential projections to the thalamus or anterior cingulate. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: Deep layer (non-IT) excitatory neuron', Author Categories: 'CrossArea_subclass', cluster L6b. | | TAC3-positive striatal interneuron (CL:4042001) | A GABAergic interneuron that has its soma located in the striatum and that has an enriched expression of the gene TAC3. | A GABAergic interneuron that has its soma located in the striatum and that has an enriched expression of the genes TAC3 and LHX6. | | ependymal cell (CL:0000065) | A neurectoderm derived cell that lines the neural lumen. | A neuroepithelial glial cell, derived from a radial glial cell originating from the neuroectoderm, lines the ventricles of the brain and the central canal of the spinal cord. This cell is characterized by the presence of cilia on its apical surface, which can be motile or non-motile. | | multinucleated giant cell (CL:0000647) | A phagocytic cell formed by the fusion of macrophages, occurs in chronic inflammatory responses to persistent microorganism such as M.tuberculosis, component of granulomas. Sometimes used to refer to megakaryocytes. | A phagocytic syncytial cell formed by the fusion of macrophages, occurs in chronic inflammatory responses to persistent microorganism such as M.tuberculosis, component of granulomas. Sometimes used to refer to megakaryocytes. | | L5 extratelencephalic projecting glutamatergic cortical neuron (CL:4023041) | A glutamatergic neuron, with a soma found in the deeper portion of L5, that has long-range axonal projections including deep subcortical targets outside of the telencephalon and, in some cases, the spinal cord. While the L5 ET neuron projections are not limited to ET targets, they are clearly differentiated from the neuron subclasses whose projections are constrained to intratelencephalic (IT) targets. L5 ET neurons are generally the largest excitatory cortical neurons, typically having a thick apical dendrite with a prominent dendritic tuft in layer 1 and displaying burst-firing physiological characteristics. | A transcriptomically distinct glutamatergic neuron, with a soma found in the deeper portion of L5, that has long-range axonal projections including deep subcortical targets outside of the telencephalon and, in some cases, the spinal cord. While the L5 ET neuron projections are not limited to ET targets, they are clearly differentiated from the neuron subclasses whose projections are constrained to intratelencephalic (IT) targets. L5 ET neurons are generally the largest excitatory cortical neurons, typically having a thick apical dendrite with a prominent dendritic tuft in layer 1 and displaying burst-firing physiological characteristics. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: Deep layer (non-IT) excitatory neurons ', Author Categories: 'CrossArea_subclass', clusters L5 ET. | | L6 corticothalamic-projecting glutamatergic cortical neuron (CL:4023042) | A corticothalamic-projecting neuron with a soma found in cortical layer 6. | A transcriptomically distinct corticothalamic-projecting neuron with a soma found in cortical layer 6. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: Deep layer (non-IT) excitatory neurons', Author Categories: 'CrossArea_subclass', clusters L6 CT. | | trophoblast cell (CL:0000351) | An extraembryonic cell that develops from a trophectodermal cell. This cell is found in the outer layer of the blastocyst and can invade other structures in the uterus once the blastocyst implants into the uterine wall. A trophoblast cell is involved in the implantation of the embryo into the uterine wall, placental formation, remodelling of maternal vasculature in the uterus, nutrient and gas exchange, hormone production, and immune modulation to support fetal development. | An extraembryonic cell that develops from a trophectodermal cell. This cell is found in the outer layer of the blastocyst and can invade other structures in the uterus once the blastocyst implants into the uterine wall. A trophoblast cell is involved in the implantation of the embryo into the uterine wall, placental formation, remodelling of maternal vasculature in the uterus, nutrient and gas exchange, hormone production, and immune modulation to support fetal development. | | mesothelial cell (CL:0000077) | A flattened epithelial cell of mesenchymal origin that lines the serous cavity. | A flat, squamous-like epithelial cell of mesodermal origin. It forms the mesothelium, which lines the body's serous cavities including the pleural, peritoneal, and pericardial spaces. This cell plays a crucial role in synthesizing and secreting lubricants, such as glycosaminoglycans and surfactants, which minimize friction between adjacent tissues during movement. | | multinuclear osteoclast (CL:0000779) | A specialized multinuclear osteoclast associated with the absorption and removal of bone. | A specialized multinuclear osteoclast, forming a syncytium through the fusion of mononuclear precursor cells, associated with the absorption and removal of bone. |
</details>
<details> <summary>Classes added: 34</summary>
| Term | ----| | cuboidal granulosa cell (CL:4033084) | | intestinal fibroblastic reticular cell (CL:4052004) | | angiogenic pericyte (CL:4047012) | | crypt-bottom fibroblast (CL:4052008) | | squamous granulosa cell (CL:4033083) | | early enterocyte (CL:4047019) | | immature pericyte (CL:4047007) | | neuronal-restricted precursor (CL:4042021) | | fetal artery endothelial cell (CL:4047006) | | GABAergic interneuron of the posterior substantia nigra pars reticulata (CL:4042027) | | subepithelial intestinal fibroblast (CL:4052007) | | GABAergic interneuron of the anterior substantia nigra pars reticulata (CL:4042026) | | striatal pthlh-expressing interneuron (CL:4042023) | | fetal vein endothelial cell (CL:4047011) | | beta2-tanycyte (CL:4042020) | | intestinal subserosal fibroblast (CL:4052005) | | beta1-tanycyte (CL:4042019) | | intestinal villus capillary endothelial cell (CL:4052003) | | alpha1-tanycyte (CL:4042017) | | astrocyte-restricted precursor (CL:4042022) | | intestinal enteroendocrine progenitor (CL:4052006) | | striatal PTHLH MOXD1 expressing interneuron (CL:4042024) | | intercalated cell of salivary gland (CL:4052048) | | pre-theca cell (CL:4052010) | | alpha2-tanycyte (CL:4042018) | | follicle associated enterocyte (CL:4052011) | | syncytial cell (CL:4052002) | | early colonocyte (CL:4047018) | | multiciliated ependymal cell (CL:4052001) | | striated cell of salivary gland (CL:4052049) | | substantia nigra dopaminergic neuron (CL:4042025) | | BEST4+ colonocyte (CL:4047052) | | small intestine BEST4+ enterocyte (CL:4047051) | | crypt-top fibroblast (CL:4052009) |
</details>
<details> <summary>Text definitions added: 39</summary>
| Term | New Text Definition | ----|----| | immature pericyte (CL:4047007) | A pericyte that is in an early stage of development, found in newly forming or remodeling blood vessels. An immature pericyte is characterized by it's mesenchymal stem cell-like properties and high proliferative capacity, which allows it to differentiate into various types of pericytes and contribute to the structural and functional maturation of the vasculature. Immature pericytes are stellate in new vessels and elongated with less protrusions in remodeling vessels. | | striatal pthlh-expressing interneuron (CL:4042023) | A GABAergic interneuron expressing PTHLH and PVALB that has its soma in a striatum. This GABAergic interneuron type presents a spatial expression gradient of PVALB in the mouse striatum. | | astrocyte-restricted precursor (CL:4042022) | A progenitor cell of the central nervous system that differentiates exclusively onto astrocytes. This progenitor cell expresses CD44 and S100 calcium-binding protein B. | | fetal artery endothelial cell (CL:4047006) | An endothelial cell that lines an artery in the fetal circulatory system. | | crypt-bottom fibroblast (CL:4052008) | A subepithelial intestinal fibroblast that is located adjacent to the base of the crypt of Lieberkühn, near the intestinal stem cells. Characterized by low PDGFRα expression, this cell is crucial for maintaining the intestinal stem cell niche. Crypt-bottom fibroblast secretes key signaling molecules including canonical Wnt ligands (Wnt2, Wnt2b), Wnt potentiators (Rspo3), and BMP inhibitors (Grem1), which collectively regulate intestinal stem cell function and epithelial homeostasis. | | striatal PTHLH MOXD1 expressing interneuron (CL:4042024) | A pthlh-expressing interneuron that expresses MOXD1 and has its soma in a striatum. | | GABAergic interneuron of the anterior substantia nigra pars reticulata (CL:4042026) | A GABAergic interneuron that has its soma in the anterior section of the substantia nigra pars reticulata. This GABAergic interneuron is characterized by the expression of Six3 and Foxp1 and it develops from Nkx6-2 expressing neuronal progenitors in the ventrolateral midbrain-diencephalon region. | | intercalated cell of salivary gland (CL:4052048) | A cuboidal epithelial cell that is part of the intercalated duct of salivary gland. This cell expresses proteins commonly associated with acinar cells and displays calcium signaling characteristics similar to secretory cells, indicating an active role in the secretory process rather than ion reabsorption. | | follicle associated enterocyte (CL:4052011) | An enterocyte found in the follicle-associated epithelium (FAE) that covers Peyer's patches and other mucosa-associated lymphoid tissues. This cell has reduced absorptive capacity and expresses higher levels of chemokines CCL20 and CXCL16, compared to regular villus enterocytes. It contributes to antigen sampling and immune interactions, supporting the specialized function of the FAE in mucosal immunity. | | intestinal subserosal fibroblast (CL:4052005) | A fibroblast that is part of the subserosa of intestine. This cell interacts with immune cells and play roles in inflammation and fibrosis. In certain conditions, such as Crohn's disease, subserosal fibroblast may differentiate into myofibroblasts. | | syncytial cell (CL:4052002) | A multinucleate cell formed by the fusion of multiple uninuclear cells through plasma membrane fusion. This process leads to a single large cell containing multiple nuclei within a shared cytoplasm. | | stratified cuboidal epithelial cell (CL:0000241) | A stratified epithelial cell that is part of cuboidal epithelium, characterized by multiple layers of cuboidal cells forming the apical layer. This provides a protective lining for ducts in large glands, such as sweat glands. | | BEST4+ colonocyte (CL:4047052) | An enterocyte of the human colon expressing bestrophin-4 (BEST4) calcium-activated ion channels. These cells have a distinct transcriptomic profile compared to other enterocytes and are scattered through the colon epithelium. | | GABAergic interneuron of the posterior substantia nigra pars reticulata (CL:4042027) | A GABAergic interneuron that has its soma in the posterior section of the substantia nigra pars reticulata. This GABAergic interneuron is characterised by the expression of the transcription factors Pax5, Ctip2 and Pou6f2 and it develops from the ventrolateral r1 neuroepithelium expresing NKX61. | | alpha1-tanycyte (CL:4042017) | A tanycyte cell found in the ventromedial and dorsomedial nuclei of the hypothalamus. This type of tanycyte extends its protrusions close to parenchymal neurons without contacting blood vessels. It expresses the glial marker S-100β. | | squamous granulosa cell (CL:4033083) | A granulosa cell that has a squamous morphology and form a single layer around the oocyte in primordial follicles. This cell develops directly into a cuboidal granulosa cell during the primordial-to-primary follicle transition. | | intestinal villus capillary endothelial cell (CL:4052003) | A capillary endothelial cell that is part of the intestinal villus. This cell is highly fenestrated, with fenestrations most numerous at the villus tips, and plays a vital role in nutrient absorption and maintaining the selective permeability of the intestinal barrier. | | syncytial epithelial cell (CL:0000420) | An epithelial cell that forms a syncytium, which is a multinucleated cell resulting from the fusion of multiple cells. | | early enterocyte (CL:4047019) | An enterocyte in the early stages of development, located above the transit-amplifying cell zone in the intestinal crypt-villus axis. | | subepithelial intestinal fibroblast (CL:4052007) | A fibroblast located adjacent to the intestinal epithelium in both the small intestine and colon, specifically around the crypts. This cell is characterized by the expression of PDGFRα and various collagen isoforms, including COL4A5 and COL4A6. It secretes signalling molecules like TGF-β, Wnt ligands, and BMPs, which are crucial for epithelial homeostasis, intestinal stem cell support, and basement membrane formation. | | stratified epithelial cell (CL:0000079) | An epithelial cell, organized into multiple layers, with only the basal layer being in contact with the basement membrane. | | multiciliated ependymal cell (CL:4052001) | An ependymal cell that lines the lateral, third, and fourth ventricles of the brain. The cell is characterized by multiple motile cilia on its apical surface, which beats in a coordinated manner to facilitate the movement of cerebrospinal fluid (CSF), contributing to brain homeostasis. | | beta2-tanycyte (CL:4042020) | A type of tanycyte found in the floor of the infundibular recess in the brain. This tanycyte has an elongated morphology with multiple microvilli extending medially and ventrally to the median eminence, contacting the pial surface and blood vessels. This type of tanycyte expresses FGF receptors 1 and 2, is in contact with GnRH neurons, and is involved in the release of gonadotropin-releasing hormone (GnRH). | | fetal vein endothelial cell (CL:4047011) | An endothelial cell that lines the veins in the fetal circulatory system. | | cuboidal granulosa cell (CL:4033084) | A granulosa cell that has a cuboidal morphology and develops from squamous granulosa cell during the transition between primordial follicle to primary follicle. Cuboidal granulosa cells proliferate to form a second layer within secondary follicles. | | squamous epithelial cell (CL:0000076) | Any epithelial cell that is part of some squamous epithelium. | | neuronal-restricted precursor (CL:4042021) | A progenitor cell of the central nervous system that differentiates exclusively onto neurons. This progenitor cell is found in a hippocampus subventricular zone, developing cortex and spinal cord of the central nervous system. | | angiogenic pericyte (CL:4047012) | A specialized pericyte that actively participates in the formation of new blood vessels during angiogenesis by undergoing phenotypic changes, increasing proliferation, and interacting closely with endothelial cells. | | striated cell of salivary gland (CL:4052049) | An columnar/cuboidal epithelial cell that is part of the striated duct of salivary gland, characterized by basal striations formed by infoldings of the plasma membrane. This cell play a crucial role in modifying the electrolyte composition and concentration of saliva through active ion transport, particularly the absorption of sodium and secretion of potassium. | | early colonocyte (CL:4047018) | An enterocyte that is part of the colon, in the early stages of differentiation, located in the intestinal crypt-villus axis. | | small intestine BEST4+ enterocyte (CL:4047051) | An enterocyte of the human small intestine expressing bestrophin-4 (BEST4) calcium-activated ion channels. These enterocytes have a disinctive transcriptomic profile and are scattered through the small intestine epithelium. | | substantia nigra dopaminergic neuron (CL:4042025) | A midbrain dopaminergic neuron that has its soma located in a substantia nigra. This dopaminergic neuron type is highly metabolically active and it is involved in the regulation of movement, cognition, motivation and reward. Neurodegeneration of this dopaminergic neuronal type causes loss in fine motor control in Parkinson's Disease. | | intestinal fibroblastic reticular cell (CL:4052004) | A specialized fibroblastic reticular cell that is part of gut-associated lymphoid tissue (GALT), responsible for forming a structural network that facilitates immune cell interactions. This cell is found in Peyer's patches, cryptopatches, and isolated lymphoid follicles. It plays crucial roles in maintaining intestinal immunity by controlling innate lymphoid cell homeostasis and function, organizing lymphoid structures, and contributing to intestinal microbiome balance. | | intestinal enteroendocrine progenitor (CL:4052006) | An epithelial cell that is part of the crypt of Lieberkuhn, originating from intestinal stem cells and giving rise to enteroendocrine cells (EECs). In mouse and human, this cell can be characterized by the expression of Neurog3, and has the ability to proliferate and differentiate into multiple EEC subtypes. Its proliferative potential contributes to crypt growth, distinguishing it from fully differentiated EECs. | | crypt-top fibroblast (CL:4052009) | A subepithelial intestinal fibroblast that is located adjacent to the top of the crypt of Lieberkuhn. Characterized by high experession of PDGFRα, this cell secretes a range of signaling factors, including WNTs and BMPs, that drive epithelial differentiation, creating a gradient that regulates the balance between stem cell maintenance and differentiation. | | stratified squamous epithelial cell (CL:0000240) | A stratified epithelial cell that is part of squamous epithelium, characterized by multiple layers of cells. The basal layer is directly attached to the basement membrane and the apical layer consists of flattened squamous cells. This provides a protective barrier, commonly found in areas subject to abrasion, such as the skin, oral cavity, and esophagus. | | alpha2-tanycyte (CL:4042018) | A type of tanycyte found in the dorsomedial arcuate nucleus of the hypothalamus. This mono-ciliated tanycyte extends its protrusion to the arcuate nucleus and expresses the glial marker S-100β. | | pre-theca cell (CL:4052010) | A stromal cell that serves as a precursor to the theca cell layers in the ovary growing follicles. This cell is present in the early stages of follicular growth, particularly in smaller follicles. Unlike mature theca cell, a pre-theca cell is initially non-steroidogenic and lacks luteinizing hormone receptors. | | beta1-tanycyte (CL:4042019) | A type of tanycyte found in the lateral infundibular recess of the brain. This tanycyte has an elongated morphology with multiple microvilli extending to the third ventricle in the lateral zones of the median eminence. This type of tanycyte expresses FGF receptors 1 and 2, is in contact with GnRH neurons, and is involved in the release of gonadotropin-releasing hormone (GnRH). |
</details>
<details> <summary>Synonyms added: 78</summary>
| Term | New Synonym | Predicate | ----|----|----| | immature pericyte (CL:4047007) | imPCs | oio:hasRelatedSynonym | | cuboidal granulosa cell (CL:4033084) | columnar GC | oio:hasRelatedSynonym | | immature pericyte (CL:4047007) | immature PCs | oio:hasRelatedSynonym | | early colonocyte (CL:4047018) | early enterocyte of colon | oio:hasExactSynonym | | cuboidal granulosa cell (CL:4033084) | cuboidal GC | oio:hasRelatedSynonym | | VIP GABAergic cortical interneuron (CL:4023016) | Vip GABAergic neuron | oio:hasBroadSynonym | | pulmonary alveolar epithelial cell (CL:0000322) | alveolus of lung epithelial cell | oio:hasExactSynonym | | intercalated cell of salivary gland (CL:4052048) | salivary intercalated duct cells | oio:hasExactSynonym | | VIP GABAergic cortical interneuron (CL:4023016) | VIP type | oio:hasRelatedSynonym | | Schwann cell precursor (CL:0002375) | SCP | oio:hasRelatedSynonym | | sst GABAergic cortical interneuron (CL:4023017) | somatostatin-expressing inhibitory interneuron | oio:hasRelatedSynonym | | fetal artery endothelial cell (CL:4047006) | endothelial cell of fetal artery | oio:hasExactSynonym | | crypt-top fibroblast (CL:4052009) | top pericryptic fibroblast | oio:hasRelatedSynonym | | intercalated cell of salivary gland (CL:4052048) | intercalated duct cell | oio:hasBroadSynonym | | intestinal fibroblastic reticular cell (CL:4052004) | solitary intestinal lymphoid tissue fibroblastic reticular cell | oio:hasNarrowSynonym | | crypt-bottom fibroblast (CL:4052008) | bottom pericryptic-associated fibroblasts | oio:hasRelatedSynonym | | subepithelial intestinal fibroblast (CL:4052007) | S2 fibroblast | oio:hasRelatedSynonym | | syncytial cell (CL:4052002) | syncytium | oio:hasExactSynonym | | multinucleated giant cell (CL:0000647) | MGC | oio:hasRelatedSynonym | | intestinal enteroendocrine progenitor (CL:4052006) | EEC Progenitor | oio:hasRelatedSynonym | | astrocyte-restricted precursor (CL:4042022) | astrocyte precursor cell | oio:hasRelatedSynonym | | cuboidal granulosa cell (CL:4033084) | columnar granulosa cell | oio:hasExactSynonym | | colonocyte (CL:1000347) | enterocyte of colon | oio:hasExactSynonym | | striated cell of salivary gland (CL:4052049) | SD cells | oio:hasBroadSynonym | | fetal vein endothelial cell (CL:4047011) | fetal vein EC | oio:hasRelatedSynonym | | astrocyte-restricted precursor (CL:4042022) | ARP | oio:hasRelatedSynonym | | multiciliated ependymal cell (CL:4052001) | multiciliated ependymal cells | oio:hasBroadSynonym | | crypt-top fibroblast (CL:4052009) | S2b fibroblast | oio:hasRelatedSynonym | | neuronal-restricted precursor (CL:4042021) | NRP | oio:hasRelatedSynonym | | squamous granulosa cell (CL:4033083) | squamous GC | oio:hasRelatedSynonym | | intestinal fibroblastic reticular cell (CL:4052004) | Ccl19-expressing fibroblastic reticular cell | oio:hasNarrowSynonym | | VIP GABAergic cortical interneuron (CL:4023016) | VIP-IN | oio:hasRelatedSynonym | | GABAergic interneuron of the posterior substantia nigra pars reticulata (CL:4042027) | pSNpr | oio:hasRelatedSynonym | | alpha2-tanycyte (CL:4042018) | dmARH tanycyte | oio:hasRelatedSynonym | | intestinal villus capillary endothelial cell (CL:4052003) | villus tip endothelial cell | oio:hasRelatedSynonym | | subepithelial intestinal fibroblast (CL:4052007) | S2 mesenchymal cells | oio:hasRelatedSynonym | | fetal vein endothelial cell (CL:4047011) | fetal venous EC | oio:hasRelatedSynonym | | intercalated cell of salivary gland (CL:4052048) | Id cell | oio:hasRelatedSynonym | | crypt-bottom fibroblast (CL:4052008) | CBFs | oio:hasRelatedSynonym | | VIP GABAergic cortical interneuron (CL:4023016) | VIP neuron | oio:hasBroadSynonym | | striatal pthlh-expressing interneuron (CL:4042023) | PTHLH/PVALB cell | oio:hasRelatedSynonym | | myotube (CL:0002372) | myofiber | oio:hasExactSynonym | | fibroblastic reticular cell (CL:0009101) | FRC | oio:hasRelatedSynonym | | intestinal fibroblastic reticular cell (CL:4052004) | gut-associated secondary lymphoid organs fibroblastic reticular cell | oio:hasRelatedSynonym | | pre-theca cell (CL:4052010) | early theca cell | oio:hasExactSynonym | | beta1-tanycyte (CL:4042019) | vmARH tanycyte | oio:hasRelatedSynonym | | sst GABAergic cortical interneuron (CL:4023017) | SOM+ inhibitory interneuron | oio:hasRelatedSynonym | | pulmonary alveolar epithelial cell (CL:0000322) | epithelial cell of alveolus of lung | oio:hasExactSynonym | | ependymal cell (CL:0000065) | ependymocyte | oio:hasNarrowSynonym | | follicle associated enterocyte (CL:4052011) | follicular enterocyte | oio:hasRelatedSynonym | | VIP GABAergic cortical interneuron (CL:4023016) | cortical VIP neuron | oio:hasRelatedSynonym | | follicle associated enterocyte (CL:4052011) | FAE enterocyte | oio:hasRelatedSynonym | | GABAergic interneuron of the anterior substantia nigra pars reticulata (CL:4042026) | aSNpr | oio:hasRelatedSynonym | | cuboidal granulosa cell (CL:4033084) | cuboidal epithelial granulosa cell | oio:hasExactSynonym | | sst GABAergic cortical interneuron (CL:4023017) | SST+ IN | oio:hasRelatedSynonym | | VIP GABAergic cortical interneuron (CL:4023016) | Vip | oio:hasRelatedSynonym | | multinucleate cell (CL:0000228) | polynuclear cells | oio:hasExactSynonym | | myotube (CL:0002372) | myofibril | oio:hasExactSynonym | | VIP GABAergic cortical interneuron (CL:4023016) | VIP interneuron | oio:hasBroadSynonym | | follicle associated enterocyte (CL:4052011) | follicle-associated epithelium enterocyte | oio:hasExactSynonym | | striatal pthlh-expressing interneuron (CL:4042023) | PTHLH +/PVALB+ interneuron | oio:hasRelatedSynonym | | alpha1-tanycyte (CL:4042017) | DMH tanycyte | oio:hasRelatedSynonym | | syncytial cell (CL:4052002) | SC | oio:hasRelatedSynonym | | squamous granulosa cell (CL:4033083) | flattened granulosa cell | oio:hasExactSynonym | | intestinal villus capillary endothelial cell (CL:4052003) | villus blood capillary endothelial cells | oio:hasBroadSynonym | | crypt-top fibroblast (CL:4052009) | CTFs | oio:hasRelatedSynonym | | fetal artery endothelial cell (CL:4047006) | fetal artery EC | oio:hasExactSynonym | | fetal artery endothelial cell (CL:4047006) | fetal arterial EC | oio:hasExactSynonym | | alpha1-tanycyte (CL:4042017) | VMH tanycyte | oio:hasRelatedSynonym | | pre-theca cell (CL:4052010) | progenitor theca cell | oio:hasExactSynonym | | VIP GABAergic cortical interneuron (CL:4023016) | VIP-Expressing GABAergic Neuron | oio:hasBroadSynonym | | squamous granulosa cell (CL:4033083) | pre-granulosa cell | oio:hasRelatedSynonym | | substantia nigra dopaminergic neuron (CL:4042025) | SNpc dopaminergic neuron | oio:hasNarrowSynonym | | multinucleate cell (CL:0000228) | multinucleated cells | oio:hasExactSynonym | | striated cell of salivary gland (CL:4052049) | striated duct cells | oio:hasBroadSynonym | | beta2-tanycyte (CL:4042020) | ME tanycyte | oio:hasRelatedSynonym | | fetal vein endothelial cell (CL:4047011) | fetal venous endothelial cell | oio:hasExactSynonym | | multiciliated ependymal cell (CL:4052001) | E1 | oio:hasRelatedSynonym |
</details>
<details> <summary>Synonyms removed: 7</summary>
| Term | Removed Synonym | ----|----| | myotube (CL:0002372) | myotubule | | ependymal cell (CL:0000065) | ependymocyte | | multinucleate cell (CL:0000228) | syncytial cell | | myotube (CL:0002372) | single cell sarcomere | | multinucleate cell (CL:0000228) | syncitium | | multinucleate cell (CL:0000228) | syncytium | | caudal ganglionic eminence derived cortical interneuron (CL:4023064) | CGE interneuron |
</details>
<details> <summary>Nodes added to subset: 1</summary>
| Term | Subset | ----|----| | L6b glutamatergic cortical neuron (CL:4023038) | human_reference_atlas |
</details>
<details> <summary>Nodes obsoleted with replacement: 1</summary>
| Term | Replacement | ----|----| | obsolete epithelial cell of alveolus of lung (CL:0010003) | pulmonary alveolar epithelial cell (CL:0000322) |
</details>
<details> <summary>Nodes renamed: 4</summary>
| ID | Old Label | New Label | ----|----|----| | CL:0010003 | epithelial cell of alveolus of lung | obsolete epithelial cell of alveolus of lung | | CL:4030026 | BEST4+ intestinal epithelial cell, human | BEST4+ enteroycte | | CL:1000347 | enterocyte of colon | colonocyte | | CL:4023064 | caudal ganglionic eminence derived interneuron | caudal ganglionic eminence derived cortical interneuron |
</details>
<details> <summary>Mappings removed: 2</summary>
| Subject | Predicate | Object | ----|----|----| | multinucleate cell (CL:0000228) | oio:hasDbXref | AEO:0000203 | | multinucleate cell (CL:0000228) | oio:hasDbXref | WBbt:0008074 |
</details>
What's Changed
- Fixes #2508 added multiciliated ependymal cell by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2509
- t-type-GABAergic-VIP-cortical-interneuron-definition by @AvolaAmg in https://github.com/obophenotype/cell-ontology/pull/2489
- Fixes #2480 Refactor multinucleated cells and subclasses by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2501
- Re-done-Alpha1,2 Beta1,2 tanycyte,NTR by @AvolaAmg in https://github.com/obophenotype/cell-ontology/pull/2506
- Replace only_in_taxon by in_taxon. by @gouttegd in https://github.com/obophenotype/cell-ontology/pull/2488
- Add an ID range for KGCL-mediated changes. by @gouttegd in https://github.com/obophenotype/cell-ontology/pull/2522
- new term fetal artery endothelial cell added by @JABelfiore in https://github.com/obophenotype/cell-ontology/pull/2505
- Fixes #2458 Lung ciliated cell by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2507
- Fixes #2479 Added textual and logical definition for stratified epithelial cell and subclasses by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2520
- Cycling stromal cell ID update (multiple with same ID) by @JABelfiore in https://github.com/obophenotype/cell-ontology/pull/2529
- Fixes #2510 Revise ependymal cell and subclasses by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2511
- Fixes #2429 merge 'epithelial cell of alveolus of lung' by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2535
- Fixes #2513 text and logical def mesothelial cell by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2534
- Fixes #2422 develops_from axiom on blood vessel endothelial cell strict by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2492
- Bump actions/download-artifact from 2 to 4.1.7 in /.github/workflows by @dependabot in https://github.com/obophenotype/cell-ontology/pull/2539
- Fixes #2538 Text definition CD1c-positive myeloid dendritic cell by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2541
- Revert "Bump actions/download-artifact from 2 to 4.1.7 in /.github/workflows" by @anitacaron in https://github.com/obophenotype/cell-ontology/pull/2546
- new term immature pericyte added by @JABelfiore in https://github.com/obophenotype/cell-ontology/pull/2504
- Fixes #2515 Updated textual and logical defs of schwann cell precursors by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2540
- Fixes #2496 fetal vein EC definition by @JABelfiore in https://github.com/obophenotype/cell-ontology/pull/2543
- Enforce taxon constraints by @gouttegd in https://github.com/obophenotype/cell-ontology/pull/2526
- Adding validated, approved CellGuide patterns by @dosumis in https://github.com/obophenotype/cell-ontology/pull/2530
- Update release documentation by @anitacaron in https://github.com/obophenotype/cell-ontology/pull/2547
- Normalize annotations in definition to only have
oboInOwl:hasDbXrefby @anitacaron in https://github.com/obophenotype/cell-ontology/pull/2548 - Relax taxon constraints for some cell types found beyond mammals by @gouttegd in https://github.com/obophenotype/cell-ontology/pull/2552
- Update resolving_merge_conflicts.md by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2554
- Fixes #2517 angiogenic pericyte new term by @JABelfiore in https://github.com/obophenotype/cell-ontology/pull/2544
- Add
def-not-only-xref-violation.sparqlby @anitacaron in https://github.com/obophenotype/cell-ontology/pull/2549 - BEST4 enterocyte and subtypes by @JABelfiore in https://github.com/obophenotype/cell-ontology/pull/2465
- NTR-astrocyte-restricted-precursor-and-neuronal-restricted-precursor by @AvolaAmg in https://github.com/obophenotype/cell-ontology/pull/2512
- 2460 revise def multiciliated epithelial cell by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2482
- Fixes #2524 Added intercalated cell of salivary gland and striated cell of salivary gland by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2559
- gogoeditdiff upload action upgrade by @hkir-dev in https://github.com/obophenotype/cell-ontology/pull/2570
- gogoeditdiff download action upgrade by @hkir-dev in https://github.com/obophenotype/cell-ontology/pull/2573
- Fixes #2476 NTR- intestinal villus capillary endothelial cell by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2572
- Fixes #2521 logical defs of syncytial cell and subclasses updated by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2574
- Update cl-edit.owl by @dosumis in https://github.com/obophenotype/cell-ontology/pull/2597
- Fixes #2578 -NTR- fibroblastic reticular cell by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2581
- Fixes #2586 NTR-enteroendocrine progenitor by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2588
- NTR pthlh-expressing interneuron for Basal Ganglia BICAN by @AvolaAmg in https://github.com/obophenotype/cell-ontology/pull/2569
- Fixes #2576 ntr intestinal subserosal fibroblast by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2584
- Add a LHX6 marker to TAC3-positive striatal interneuron definition by @AvolaAmg in https://github.com/obophenotype/cell-ontology/pull/2598
- mge-derived-cortical-interneuron-hierarchy by @AvolaAmg in https://github.com/obophenotype/cell-ontology/pull/2536
- Fixes #2567 NTR - subepithelial intestinal fibroblast and two subclasses by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2591
- GABAergic interneuron pSNpr aSNpr for BICAN Basal Ganglia by @AvolaAmg in https://github.com/obophenotype/cell-ontology/pull/2600
- change label of caudal ganglionic eminence derived interneuron by @AvolaAmg in https://github.com/obophenotype/cell-ontology/pull/2599
- Fixes #2602 NTR granulosa cells and remake class hierarchy by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2608
- Fixes #2527 - NTR- pre-theca-cell by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2613
- NTR-substantia-nigra-dopaminergic-neuron-for-Basal-Ganglia-BICAN by @AvolaAmg in https://github.com/obophenotype/cell-ontology/pull/2566
- logical definition photoreceptor update by @JABelfiore in https://github.com/obophenotype/cell-ontology/pull/2473
- NTR early enterocyte by @JABelfiore in https://github.com/obophenotype/cell-ontology/pull/2607
- Fixes #2587 NTR- follicle associated enterocyte by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2614
- Add-t-type-definition-to-all-the-Jorstad-CrossArea_Subclass-with-CxG-reference by @AvolaAmg in https://github.com/obophenotype/cell-ontology/pull/2612
- Add documentation on adding PRO terms by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2606
- Early enterocyte of colon by @JABelfiore in https://github.com/obophenotype/cell-ontology/pull/2604
- Update HRA components by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2615
- Address #2617 wrong AP for definition of pSNpr by @aleixpuigb in https://github.com/obophenotype/cell-ontology/pull/2618
- CL release v2024-09-26 by @Caroline-99 in https://github.com/obophenotype/cell-ontology/pull/2619
New Contributors
- @dependabot made their first contribution in https://github.com/obophenotype/cell-ontology/pull/2539
Full Changelog: https://github.com/obophenotype/cell-ontology/compare/v2024-08-16...v2024-09-26
Files
obophenotype/cell-ontology-v2024-09-26.zip
Files
(24.0 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:9eb34bf8ef4aecb227ba8dbc8c9342aa
|
24.0 MB | Preview Download |
Additional details
Related works
- Is supplement to
- Software: https://github.com/obophenotype/cell-ontology/tree/v2024-09-26 (URL)