Published January 5, 2023 | Version v1
Dataset Open

Oopsacas minuta alternative masked genomes and predicted proteomes

Description

Oopsacas minuta alternative versions.

The genome was masked using the Dfam TE tool container (https://github.com/Dfam-consortium/TETools).

oopsacas_minuta_hardmasked.fna : genome hardmasked (with N). Low complexity regions are also masked.

oopsacas_minuta_hardmasked_nolow.fna:  genome hardmasked (with N). Low complexity regions are not masked.

oopsacas_minuta_softmasked.fna: genome softmasked (lower-case letters). Low complexity regions are also masked.

oopsacas_minuta_softmasked_nolow.fna: genome softmasked (lower-case letters). Low complexity regions are not masked.

Proteins were predicted using Braker v1.9.

oopsacas_minuta_hardmasked.faa : from oopsacas_minuta_hardmasked.fna

oopsacas_minuta_hardmasked_nolow.faa: fromoopsacas_minuta_hardmasked_nolow.fna

oopsacas_minuta_softmasked.faa: from oopsacas_minuta_softmasked.fna

oopsacas_minuta_softmasked_nolow.faa: from oopsacas_minuta_softmasked_nolow.fna

 

 

Files

Files (82.0 MB)

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md5:fe021c0fd57ab5a89497b207c0de79e6
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md5:788eab685fa16ddc086ccfeb4c85af7d
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