There is a newer version of the record available.

Published February 8, 2022 | Version v7
Journal article Open

Transformation of alignment files improves performance of variant callers for long-read RNA sequencing data

  • 1. UZH, SIB
  • 2. UVA School of Medicine
  • 3. PacBio USA
  • 4. UVA School of Medicine, Yale School of Medicine
  • 5. UVA School of Medicine, CPHG, UVA Cancer Center

Description

Files generated for the analyses in Souza et al.: "Transformation of alignment files improves performance of variant callers for long-read RNA sequencing data". The code that generated these files are in the repository https://github.com/vladimirsouza/lrRNAseqVariantCalling. The file names are associated with their respective file path defined in the code, where '/' were replaced by '-'. For file descriptions, see file_descriptions.csv file.

Files

file_descriptions.csv

Files (7.3 GB)

Name Size Download all
md5:d254d4e99169f1265920793fbd460feb
448 Bytes Download
md5:0d27f36ac987126843fe8216e7d666e2
1.8 kB Download
md5:0c267d46883ff065555b6fe131728dce
785 Bytes Download
md5:232cdeb555cbd27ac8872d9766a7d42f
13.0 MB Download
md5:d2372df889c545517eb801661aaa2dd2
77.7 MB Download
md5:2597f90c789b451f6c4d8baaf83c5800
10.9 MB Download
md5:aa43aec798540905f944e0e0e27930db
59.7 MB Download
md5:91be21a9267efc78c8663eedea250b93
836 Bytes Download
md5:361a94f8c3ff9f93b582e20c1152e536
4.6 kB Preview Download
md5:b460656fd11204e213373a5ff90a8569
2.0 MB Preview Download
md5:e777d9db8750ec29313e234f74b631c6
346.9 kB Preview Download
md5:a0320a127e74b33f21f69e08a49d4bb5
2.3 MB Preview Download
md5:ad4736f564d1aa71c8ead2aa4a8f330f
3.8 GB Download
md5:761aa24794074cfa591c121cb9e5319c
198.8 MB Download
md5:45e0057d6a07a369195662fca3fa8ec2
4.6 MB Download
md5:d6f17406b83ae782502b3ed8779e9ee4
3.5 MB Download
md5:0e3db67309b8876b587ee4a9eddb2bf0
5.0 MB Download
md5:1b068f794c567fd401f6e9828f805743
4.7 MB Download
md5:50a3fc7497c6cf3429c667c48286440f
2.4 MB Download
md5:765445b8c331cc2c1764aedfcf94a65a
3.1 MB Download
md5:878bbc8ec639a4fe3d167630aacfe9a5
4.5 MB Download
md5:01b2da85e1a2bf4ee75ad5594ce076d3
6.8 MB Download
md5:0ab4c021cb288256246de3b628e9ab6d
560.9 kB Download
md5:1ef7d3d031b223776fca759f1e16df2e
70 Bytes Download
md5:d998e58387bcebd14628a827d61c6df1
8.9 MB Download
md5:324ade5434d376846836d7a218d736aa
3.1 GB Download
md5:6f9aad17e8d62bbf8363e371863d2218
2.0 MB Download
md5:47330ad54830785879b65ccb7bca6309
1.2 MB Download
md5:63070239d56ce6bc26023fa4fe8a7fbb
2.1 MB Download
md5:24a43bbe7b8f60bd0c7d0ad7b20b6291
2.0 MB Download
md5:7a89760239d95d68cc8f32490d6cbd93
1.6 MB Download
md5:02ad4acd5a2b49400f43176045c8b147
1.2 MB Download
md5:4be7387dc8c3bd5c1b83eccef51c0b12
2.2 MB Download
md5:6aae1ebdd42cd270e7181d936355596f
3.5 MB Download
md5:81faf0180c624de8fd9c245b2783e537
292.8 kB Download