Published March 20, 2023
| Version v1
Journal article
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Source Code - Enzyme-enriched condensates show self-propulsion, positioning, and coexistence
- 1. Arnold Sommerfeld Center for Theoretical Physics and Center for NanoScience, Department of Physics, Ludwig-Maximilians-Universität München
Description
This repository contains the source code for the Finite Element simulations, and a Mathematica notebook that illustrates analytic calculations, for the article "Enzyme-Enriched Condensates Show Self-Propulsion, Positioning, and Coexistence" published in Physical Review Letters 130, 128401.
| File | Description |
|---|---|
| AnalyticCalculations-1d.nb | Mathematica notebook that illustrates the analytical calculations. |
| steady_state_1d_droplet.zip | Source code and data for 1D FEM simulations of a droplet in steady state. |
| self_propulsion_instability.zip | Source code and data for FEM simulations of a self-propelling droplet. |
| self_centering_and_oscillations.zip | Source code and data for FEM simulations of a droplet in a finite-sized container. Depending on the parameters, the droplet either shows oscillatory motion or relaxes to the center of the container. |
| coexistence.zip | Source code and data for FEM simulations that show coexistence of multiple droplets. |
| elongation.zip | Source code and data for FEM simulations of a droplet that shows a shape instability and elongates. |
| division.zip | Source code and data for FEM simulations of a dividing droplet. |
| scaffold_proteins.zip | Source code and data for FEM simulations for a droplet that, instead of enzymes alone, consists of a scaffold protein that attracts enzymes. |
Files
coexistence.zip
Files
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Additional details
Related works
- Is supplement to
- Journal article: 10.1103/PhysRevLett.130.128401 (DOI)
- Preprint: 10.48550/arXiv.2301.00392 (DOI)