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Published November 2, 2022 | Version v1.2.0
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pmelsted/bifrost: v1.2.0

  • 1. deCODE Genetics
  • 2. Johns Hopkins University
  • 3. University of Helsinki

Description

  • GFA and FASTA output are now compressed by default. Compressed GFA/FASTA can be read by Bifrost.
  • Optional Bifrost binary output (instead of GFA/FASTA). Uses less disk space than GFA/FASTA and loads faster in memory.
  • Bifrost index output by default. Enables to load a Bifrost graph (GFA/FASTA or binary) much faster in memory.
  • Time and memory reduction on some datasets.
  • Minor bug fixes.

API and CLI compatibility breaks with previous versions but only minor changes (see Changelog). GCC version minimum requirement changes to 5.1 from 4.8.

Files

pmelsted/bifrost-v1.2.0.zip

Files (1.2 MB)

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Additional details

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