Published October 18, 2022
| Version v0.1.15
Software
Open
royerlab/aydin: v0.1.15
- 1. Chan Zuckerberg Biohub
- 2. @compileralchemy
Description
What's Changed
- DEP: Pyinstaller bump to 5.1 by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/187
- GUI: main layout refactor by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/190
- BUG: GUI layout name bug by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/191
- CONTRIBUTING guidelines update by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/194
- IT-CNN default patch_size value by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/195
- CLI: Split channels by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/197
- Contributing guideline updates by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/199
- napari version bump to 0.4.15 by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/206
- DOC: it level docstrings refactor by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/201
- Restoration variant option bug fix and refactor by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/203
- Making dependency pinnings bundle only by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/202
- torch input and target images tiling by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/192
- build: osx hook fix by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/208
- Torch unet n2t training loop refactor by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/210
- Torch unet maskout by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/209
- BUG: GUI: denoise tab selection persistence by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/212
- pytest general test speed-up by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/211
- Torch unet fstring fixes by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/213
- Torch original unet by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/216
- Torch unet residual by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/215
- Torch model demos by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/218
- Torch Linear Scaling UNet by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/217
- Relaxing torch dependency version by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/219
- Relaxing gdown version by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/220
- Misc. test fixes by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/221
- Relaxing click dependency version by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/224
- Removing googledrivedownloader from dependencies by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/225
- Relaxing nd2reader pinning by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/226
- Relaxing memoization version by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/229
- Relaxing numexpr version by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/228
- Relaxing scipy version by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/227
- Removing unused code by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/230
- Catboost regressor refactor by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/222
- Relaxing pynndescent version by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/231
- CB regressor bug fix by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/232
- Fourier Shell Correlation by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/223
- fixed min max number of estimators by @royerloic in https://github.com/royerlab/aydin/pull/234
- GUI: new egg chamber example dataset by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/237
- DOC: Example datasets gallery by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/236
- removing unused util misc modules by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/240
- New random patch generation function by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/239
- BUG: restoration cnn channel_axes parameter check fix by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/241
- Torch unet n2s by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/214
- torch random pixel masking by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/242
- zarr version is unpinned by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/243
- Torch jinet implementation by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/196
- CLI: fsc command by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/246
- Torch tests demos refactor by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/245
- BUG: 3D jinet bug patch by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/244
- psnr ssim print statements for demos and tests by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/247
- Deprecate Tensorflow related code by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/249
- Py310 support by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/248
- imagio version fix by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/253
- numexpr to numba by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/252
- Versioning for docs by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/254
- sphinx-multiversion dependency added by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/256
- Torch it cnn by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/250
- fix on n2t tests by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/258
- github labeler by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/257
- BUG: fix for cnn restoration by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/260
- Heavy tests action by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/261
- Removing numba deprecation warnings by @AhmetCanSolak in https://github.com/royerlab/aydin/pull/262
Full Changelog: https://github.com/royerlab/aydin/compare/v0.1.14...v0.1.15
Files
royerlab/aydin-v0.1.15.zip
Files
(9.8 MB)
Name | Size | Download all |
---|---|---|
md5:1435c227d93a281a3b7c2e5b99d82aab
|
9.8 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/royerlab/aydin/tree/v0.1.15 (URL)