Published October 11, 2022 | Version v1
Dataset Open

Historical Arabidopsis thaliana genomes from across its native range.

  • 1. Department of Biology, California State University San Bernardino, San Bernardino, CA 92407, USA
  • 2. Department of Biology, Pennsylvania State University, University Park, PA 16802, USA

Description

We report short-read Illumina sequencing of 131 Arabidopsis thaliana herbarium specimens across its native range collected from 1820 to 2010. Sequencing depth averaged ~6X across these genomes. Sequences from the herbarium samples showed the expected degradation patterns typical of ancient DNA with endogenous DNA content between 18.01-88.26% (mean 56%; median 74%) and enrichment of cytosine to thymine substitutions at fragment ends. We provide access to the sequences upon request.

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