OpenOmics/metavirs: v1.0.0

metavirs (v1.0.0) Notable Changes

• 95369fa60b0f18429fd073f523bf0d5832be3cd7: Adding support for mixed single-end and paired-end inputs
• abad1977655ae0813bfddc549d888a9576f87583: Adding dry-runs with paired-end, single-end, and mixed inputs
• a3156521ea6621bea457cc057f618f203e030a0c: Adding improved dark mode to docs
• f95851a9d8e7290460d295197e8b0798f9e1d465: Adding Docker pulls and release information
• 26a9db1fd35dc2cba8a0167493398c554738e80e: Adding catch for github release edgecase
• 26a9db1fd35dc2cba8a0167493398c554738e80e: Passing memory limit to metaspades to avoid seg faults
• 7c8a2dfda37fa0930987326c8a69864b6f64a8b2: Moving default resources to OpenOmics shared group area
• 019823219fe9b7b73f7ed54bdb170cd3874713d9: Adding script to create chunked resource bundles
• 6827d5e7f58ee36663d971b582711e06fce55835: Adding concurrent reference file downloader
• 351a737db201dc4505176975d5fcdecbe25390a6: Adding install sub command to download the pipeline's resource bundle
• 0765be56eb8523f851e45a944c53f4bc629252e1: Adding script to cache software containers locally
• 61318fa674b625267c2641f966f7b8b946beb5a2: Adding step to ensure tmp dir bind path resolves correctly
• f692c6c0fe8dc465af11ee3b6520b6acb08466d6: Adding new option to provide path to a downloaded resource bundle
• e653b2a9b8111acaa51306ce60efb38e367b37e3: Bumping up wall times of each assembler
• 09f11ffd24bf4beacf19a92d1c506ad37c3f2070: Adding documentation new install sub command and other new features
• 9560a93aab77a734332659201309308edf3ded54: Reducing threads for better availibility of smaller clusters
• c34232b649fe2642072cf194c627c486894ea715: Making prep_metaquast rule more fault tolerant