Published September 22, 2022
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Two novel Oidiodendron species isolated from roots of Vaccinium boninense in the Bonin Islands, Japan
- 1. School of Pharmacy, Nihon University, 7-7-1 Narashinodai, Funabashi, Chiba 274-8555, Japan
- 2. Medical Mycology Research Center, Chiba University, 1-8-1 Inohana, Chuo, Chiba, 260-8673 Japan
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Hirose, Dai, Tokiwa, Toshiyuki, Yaguchi, Takashi (2022): Two novel Oidiodendron species isolated from roots of Vaccinium boninense in the Bonin Islands, Japan. Phytotaxa 566 (1): 89-104, DOI: 10.11646/phytotaxa.566.1.5, URL: http://dx.doi.org/10.11646/phytotaxa.566.1.5
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References
- Barron, G.L. (1962) New species and new records of Oidiodendron. Canadian Journal of Botany 40: 589-607.
- Baba, T. & Hirose, D. (2020) Morphological characteristics of rhizodermal colonization by Leohumicola species in an ericaceous host. Plant Roots 14: 1-10. https://doi.org/10.3117/plantroot.14.1
- Baba, T. & Hirose, D. (2021) Slow-growing fungi belonging to the unnamed lineage in Chaetothyriomycetidae form hyphal coils in vital ericaceous rhizodermal cells in vitro. Fungal Biology 125: 1026-1035. https://doi.org/10.1016/j.funbio.2021.07.003
- Baba, T., Hirose, D., Noma, S. & Ban, T. (2021) Inoculation with two Oidiodendron maius strains differentially alters the morphological characteristics of fibrous and pioneer roots of Vaccinium virgatum 'Tifblue' cuttings. Scientia Horticulturae 281: 109948. https://doi.org/10.1016/j.scienta.2021.109948
- Couture, M., Fortin, J. & Dalpe, Y. (1983) Oidiodendron griseum Robak: an endophyte of ericoid mycorrhiza in Vaccinium spp. New Phytologist 95: 375-380. https://doi.org/10.1111/j.1469-8137.1983.tb03505.x
- Crous, P.W., Wingfield, M.J., Burgess, T.I., Hardy, G.E.S.J., Gene, J., Guarro, J., Baseia, I.G., Garcia, D., Gusmao, L.F.P., Souza-Motta, C.M., Thangavel, R., Adamik, S., Barili, A., Barnes, C.W., Bezerra, J.D.P., Bordallo, J.J., Cano-Lira, J.F., de Oliveira, R.J.V., Ercole, E., ... & Groenewald, J.Z. (2018) Fungal Planet description sheets: 716-784. Persoonia 40: 240-393. https://doi.org/10.3767/persoonia.2018.40.10
- Currah, R., Tsuneda, A. & Murakami, S. (1993) Conidiogenesis in Oidiodendron periconioides and ultrastructure of ericoid mycorrhizas formed with Rhododendron brachycarpum. Canadian Journal of Botany 71: 1481-1485. https://doi.org/10.1139/b93-179
- Dalpe, Y. (1986) Axenic synthesis of ericoid mycorrhiza in Vaccinium angustifolium Ait. by Oidiodendron species. New Phytologist 103: 391-396. https://doi.org/10.1111/j.1469-8137.1986.tb00624.x
- Dalpe, Y. (1991) Statut endomycorhizien du genre Oidiodendron. Canadian Journal of Botany 69: 1712-1714. https://doi.org/10.1139/b91-217
- Darriba, D., Posada, D., Kozlov, A.M., Stamatakis, A., Morel, B. & Flouri, T. (2020) ModelTest-NG: A new and scalable tool for the selection of DNA and protein evolutionary models. Molecular Biology and Evolution 37: 291-294. https://doi.org/10.1093/molbev/msz189
- Domsch, K.H., Grams, W. & Anderson, T.H. (2007) Compendium of soil fungi second edition. IHW-Verlag, Eching.
- Douglas, G., Heslin, M. & Reid, C. (1989) Isolation of Oidiodendron maius from Rhododendron and ultrastructural characterization of synthesized mycorrhizas. Canadian Journal of Botany 67: 2206-2212. https://doi.org/10.1139/b89-280
- Edler, D., Klein, J., Antonelli, A. & Silvestro, D. (2021) raxmlGUI 2.0: A graphical interface and toolkit for phylogenetic analyses using RAxML. Methods in Ecology and Evolution 12: 373-377. http://dx.doi.org/10.1111/2041-210X.13512
- Hambleton, S., Egger, K. & Currah, R. (1998) The genus Oidiodendron: species delimitation and phylogenetic relationships based on nuclear ribosomal DNA Analysis. Mycologia 90: 854-68. https://doi.org/10.2307/3761327
- Hiradate, S. (2019) Properties of soils of the Ogasawara Islands: keys to understand past nature and find adequate management for future. Global Environmental Research 23: 29-36.
- Johnston, P.R., Quijada, L., Smith, C.A., Baral, H.O., Hosoya, T., Baschien, C., Partel, K., Zhuang, W.Y., Haelewaters, D., Park, D., Carl, S., Lopez-Giraldez, F., Wang, Z. & Townsend, J.P. (2019) A multigene phylogeny toward a new phylogenetic classification of Leotiomycetes. IMA Fungus 10: 1. https://doi.org/10.1186/s43008-019-0002-x
- Katoh, K., Rozewicki, J. & Yamada, K.D. (2019) MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Briefings in Bioinformatics 20: 1160-1166. https://doi.org/10.1093/bib/bbx108
- Kobae, Y. & Ohtomo, R. (2016) An improved method for bright-field imaging of arbuscular mycorrhizal fungi in plant roots. Soil Science and Plant Nutrition 62: 27-30. https://doi.org/10.1080/00380768.2015.1106923
- Kozlov, A.M., Darriba, D., Flouri, T., Morel, B. & Stamatakis, A. (2019) RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference. Bioinformatics 35: 4453-4455. https://doi.org/10.1093/bioinformatics/btz305
- Lemoine, F., Domelevo Entfellner, J.B., Wilkinson, E., Correia, D., Davila Felipe, M., De Oliveira, T. & Gascuel, O. (2018) Renewing Felsenstein's phylogenetic bootstrap in the era of big data. Nature 556: 452-456. https://doi.org/10.1038/s41586-018-0043-0
- Leopold, D.R. (2016) Ericoid fungal diversity: challenges and opportunities for mycorrhizal research. Fungal Ecology 24: 114-123.
- Morita, S., Kato, H., Iwasaki, N., Kusumoto, Y., Yoshida, K. & Hiradate, S. (2010) Unusually high levels of bio-available phosphate in the soils of Ogasawara Islands, Japan: Putative influence of seabirds. Geoderma 160: 155-164. https://doi.org/10.1016/j.geoderma.2010.09.008
- Murray, M.G. & Thompson, W.F. (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Research 8: 4321-4326. https://doi.org/10.1093/nar/8.19.4321
- O'Donnell, K. & Cigelink, E. (1997) Two divergent intragenomic rRNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Molecular Phylogenetics and Evolution 7: 103-116. https://doi.org/10.1006/mpev.1996.0376
- Ogawa, Y., Suda, A., Kusama-Eguchi, K., Watanabe, K. & Tokumasu, S. (2005) Intraspecific groups of Umbelopsis ramanniana inferred from nucleotide sequences of nuclear rDNA internal transcribed spacer regions and sporangiospore morphology. Mycoscience 46: 343-351. https://dx.doi.org/10.1007/s10267-005-0257-5
- Raja, H., Schoch, C.L., Hustad, V., Shearer, C. & Miller, A. (2011) Testing the phylogenetic utility of MCM7 in the Ascomycota. MycoKeys 1: 63-94. https://doi.org/10.3897/mycokeys.1.1966
- Rayner, R. (1970) A mycological colour chart. Commonwealth Mycological Institute, Surrey & British Mycological Society, Kew.
- Rice, A. & Currah, R. (2005) Oidiodendron: A survey of the named species and related anamorphs of Myxotrichum. Studies in Mycology 53: 83-120. https://doi.org/10.3114/sim.53.1.83
- Rice, A. & Currah, R. (2006) Oidiodendron maius: saprobe in Sphagnum peat, mutualist in ericaceous roots? In: Schulz, B.J.E., Boyle, C.J.C. & Sieber, T.N. (eds.) Microbial root endophytes. Springer Berlin / Heidelberg, Berlin, pp. 227-246.
- Robak, H. (1932) Investigations regarding fungi on Norwegian ground wood pulp and fungal infections at wood pulp mills. S aertrykk Nyt Mag. for Naturvidenskaberne 71: 185-330.
- Rodriguez-Andrade, E., Stchigel, A.M., Terrab, A., Guarro, J. & Cano-Lira, J.F. (2019) Diversity of xerotolerant and xerophilic fungi in honey. IMA Fungus 10: 20. https://doi.org/10.1186/s43008-019-0021-7
- Sato, T., Uzuhashi, S., Hosoya, T. & Hosaka, K. (2010) A list of fungi found in the Bonin (Ogasawara) Islands. Ogasawara Research 35: 59-160.
- Schmitt, I., Crespo, A., Divakar, P.K., Fankhauser, J.D., Herman-Sackett, E., Kalb, K., Nelsen, M.P., Nelson, N.A., Rivas-Plata, E., Shimp, A.D., Widhelm, T. & Lumbsch, H.T. (2009) New primers for promising single-copy genes in fungal phylogenetics and systematics. Persoonia 23: 35-40. https://doi.org/10.3767/003158509X470602
- Seifert, K.A., Hughes, S.J., Boulay, H. & Louis-Seize, G. (2007) Taxonomy, nomenclature and phylogeny of three cladosporium-like hyphomycetes, Sorocybe resinae, Seifertia azaleae and the Hormoconis anamorph of Amorphotheca resinae. Studies in Mycology 58: 235-245. https://doi.org/10.3114/sim.2007.58.09
- Tian, W., Zhang, C.Q., Qiao, P. & Milne, R. (2011) Diversity of culturable ericoid mycorrhizal fungi of Rhododendron decorum in Yunnan, China. Mycologia 103: 703-709. https://doi.org/10.3852/10-296
- Tokumasu, S. (1973) Notes on Japanese Oidiodendron. Transactions of the Mycological Society of Japan 14: 246-255
- Tokumasu, S. (1996) Mycofloral succession on Pinus densiflora needles on a modern site. Mycoscience 37: 313-321. https://doi.org/10.1007/BF02461303
- Toyoda, T. (2003) Flora of Bonin Islands, 2nd Ed. Enlarged & Revised, Aboc & Co., Ltd., Kamakura, Japan. [in Japanese]
- Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238-4246. https://doi.org/10.1128/jb.172.8.4238-4246.1990
- Wei, X., Chen, J., Zhang, C. & Pan, D. (2016) A new Oidiodendron maius strain isolated from Rhododendron fortunei and its effects on nitrogen uptake and plant growth. Frontiers in Microbiology 7: 1327. https://doi.org/10.3389/fmicb.2016.01327
- White, T.J., Bruns, T., Lee, S. & Taylor, J.W. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. & White, Y.J. (eds.) PCR Protocols: A Guide to Methods and Application. Academic Press, San Diego, pp 315-322.
- Xiao, G. & Berch, S. (1995) The ability of known ericoid mycorrhizal fungi to form mycorrhizae with Gaultheria shallon. Mycologia 87: 467-70. https://doi.org/10.2307/3760763