Published December 18, 2023 | Version 1.7.0
Software Open

CVUA-RRW/FooDMe: 1.7.0

Creators

  • 1. @CVUA-RRW
  • 2. @actions

Description

1.7.0

Breaking changes

Older configuration files are not compatible anymore. Update the files by adding the following line should yield the same results as before:

blast_filter_low_complexity: True

New features

It is now possible to desactivate the defualt low-complexity filter of the BLAST search. This can be advantageous if you expect your barcode to contain low-complexity sequences which could prevent getting any match at all. This behaviour can be activated/deactivated by changing the blast_filter_low_complexity from True to False.

The default behaviour (False) uses the default 'DUST' filter of the blast tool: -dust 20 64 1 -soft_masking true.

Files

CVUA-RRW/FooDMe-1.7.0.zip

Files (2.3 MB)

Name Size Download all
md5:4a6b198018abd7547d6742e502a50646
2.3 MB Preview Download

Additional details

Related works

Is supplement to
Software: https://github.com/CVUA-RRW/FooDMe/tree/1.7.0 (URL)