PdbCompAA: Check of amino acid sequence of a protein structure model provided as PDB file

PdbCompAA is a Java tool to compare the amino acid sequence of a model supplied as PDB file with that of a reference sequence. The reference amino acid sequence is read from an ASCII file, such as e.g. a file in FASTA format. For all residues in the PDB file, the presence of all required atoms is checked. This software is intended for use in protein structure model building and file validation.

When using this program, please cite:

Hofmann, A., Wlodawer, A. (2002) PCSB - a programme collection for structural biology and biophysical chemistry. Bioinformatics 18, 209-210.