Published August 17, 2022
| Version v2022-08-16
Software
Open
obophenotype/cell-ontology: v2022-08-16
Creators
- Shawn Tan
- Chris Mungall1
- Nicole Vasilevsky
- Nico Matentzoglu2
- David Osumi-Sutherland3
- paolaroncaglia
- bvarner-ebi
- Alexander Diehl4
- Damien Goutte-Gattat5
- Anita Caron6
- Melissa Haendel
- Tiago Lubiana7
- JoshuaFortriede
- Maria Keays
- Ray Stefancsik
- Ismail Ugur Bayindir
- Arlene
- Matthew Brush8
- Alan Ruttenberg4
- ybradford
- Benjamin M. Gyori9
- Bonita Lam10
- Charles Tapley Hoyt9
- JArgasinska
- Zoë May Pendlington6
- uberon
- Jim Balhoff11
- Martin Larralde12
- Jane Lomax13
- 1. Lawrence Berkeley National Laboratory
- 2. semanticly Ltd
- 3. www.virtualflybrain.org
- 4. University at Buffalo
- 5. University of Cambridge
- 6. EMBL-EBI
- 7. University of São Paulo
- 8. Oregon Health and Science University
- 9. Harvard Medical School
- 10. Agilent Technologies
- 11. @RENCI
- 12. EMBL, @zellerlab
- 13. @scibite
Description
What's Changed
- Added cite and application to readme by @shawntanzk in https://github.com/obophenotype/cell-ontology/pull/1595
- Add human_reference_atlas subset by @anitacaron in https://github.com/obophenotype/cell-ontology/pull/1497
- Standardising ORCID and contributor annotation property by @anitacaron in https://github.com/obophenotype/cell-ontology/pull/1640
- Added some cochlear nucleus neuron types by @shawntanzk in https://github.com/obophenotype/cell-ontology/pull/1634
- Addresses #1627 Update a_adding_term_cellxgene.md by @bvarner-ebi in https://github.com/obophenotype/cell-ontology/pull/1633
- Addresses #1582-NTR-epithelial_cells_DCT by @bvarner-ebi in https://github.com/obophenotype/cell-ontology/pull/1644
- Add QC for dcterms:contributor by @anitacaron in https://github.com/obophenotype/cell-ontology/pull/1646
- Addresses #1171 NTR hillock cell by @bvarner-ebi in https://github.com/obophenotype/cell-ontology/pull/1624
- Addresses #1583-NTR-connecting_tubule_principal_cell by @bvarner-ebi in https://github.com/obophenotype/cell-ontology/pull/1647
- Add
gamete-nursing cell
and subclasses. by @gouttegd in https://github.com/obophenotype/cell-ontology/pull/1626 - Addresses #1584 NTR connecting tubule intercalated cell types by @bvarner-ebi in https://github.com/obophenotype/cell-ontology/pull/1648
- Adresses #1585 NTR renal medullary fibroblast by @bvarner-ebi in https://github.com/obophenotype/cell-ontology/pull/1650
- Add telocyte (CL:0017004) by @lubianat in https://github.com/obophenotype/cell-ontology/pull/1198
- Clean up old import files. by @gouttegd in https://github.com/obophenotype/cell-ontology/pull/1653
- Addresses #1651 NTR thymus cells by @bvarner-ebi in https://github.com/obophenotype/cell-ontology/pull/1652
- Remove some fluff from cl.Makefile by @matentzn in https://github.com/obophenotype/cell-ontology/pull/1385
- Add Arwa Id range by @shawntanzk in https://github.com/obophenotype/cell-ontology/pull/1660
- Add sparql check for annotations by @anitacaron in https://github.com/obophenotype/cell-ontology/pull/1659
- Addresses #1658 'gall bladder' should be 'gallbladder' by @bvarner-ebi in https://github.com/obophenotype/cell-ontology/pull/1667
- Add taxon restriction to
epidermal cell (sensu Arthropoda)
. by @gouttegd in https://github.com/obophenotype/cell-ontology/pull/1668 - Add synonym to 'migratory cardiac neural crest cell' by @nicolevasilevsky in https://github.com/obophenotype/cell-ontology/pull/1669
- Create obsolete classes related to
alt_id
by @anitacaron in https://github.com/obophenotype/cell-ontology/pull/1662 - Added somatosensory neuron & trigeminal neuron by @shawntanzk in https://github.com/obophenotype/cell-ontology/pull/1671
- Revise label for CL_0000047 (neural stem cell) by @nicolevasilevsky in https://github.com/obophenotype/cell-ontology/pull/1673
- Replace string "Homo sapiens" with obo:NCBITaxon_9606 by @anitacaron in https://github.com/obophenotype/cell-ontology/pull/1675
- Add CL_0017003 (epithelial cell of prostatic urethra) by @lubianat in https://github.com/obophenotype/cell-ontology/pull/1172
- Add hypendymal cell by @shawntanzk in https://github.com/obophenotype/cell-ontology/pull/1676
- Add CL_0017002 (prostate neuroendocrine cell) by @lubianat in https://github.com/obophenotype/cell-ontology/pull/1170
- Remove duplicate bronchioalveolar stem cell by @shawntanzk in https://github.com/obophenotype/cell-ontology/pull/1677
- CL 16 August release by @bvarner-ebi in https://github.com/obophenotype/cell-ontology/pull/1678
Full Changelog: https://github.com/obophenotype/cell-ontology/compare/v2022-06-18...v2022-08-16
Files
obophenotype/cell-ontology-v2022-08-16.zip
Files
(51.1 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/obophenotype/cell-ontology/tree/v2022-08-16 (URL)