Published July 13, 2022
| Version v1
Journal article
Open
Addition to Sweden's freshwater sponge fauna and a phylogeographic study of Spongilla lacustris (Spongillida, Porifera) in southern Sweden
- 1. Dept. Organismal Biology, Uppsala University, Norbyvägen 18D, SE-752 36 Uppsala, Sweden. & Dept. Marine Sciences, University of Gothenburg, Box 461, SE-405 30 Göteborg, Sweden.
- 2. Dept. Organismal Biology, Uppsala University, Norbyvägen 18D, SE-752 36 Uppsala, Sweden.
Description
Robert, Chloé, Pereira, Raquel, Thollesson, Mikael (2022): Addition to Sweden's freshwater sponge fauna and a phylogeographic study of Spongilla lacustris (Spongillida, Porifera) in southern Sweden. European Journal of Taxonomy 828 (1): 138-167, DOI: 10.5852/ejt.2022.828.1861, URL: http://dx.doi.org/10.5852/ejt.2022.828.1861
Files
source.pdf
Files
(14.8 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:6c580dffc1d6ffe8849c97d31e6d9508
|
14.8 MB | Preview Download |
Linked records
Additional details
Identifiers
- LSID
- urn:lsid:zoobank.org:pub:92E8908C-818C-49CD-8E84-A95479F8E455
- LSID
- urn:lsid:plazi.org:pub:6C58FFFFFFD6FFE8FF9CFFD31E6D9508
- URL
- http://publication.plazi.org/id/6C58FFFFFFD6FFE8FF9CFFD31E6D9508
References
- Addis J.S. & Peterson K.J. 2005. Phylogenetic relationships of freshwater sponges (Porifera, Spongillina) inferred from analyses of 18S rDNA, COI mtDNA, and ITS2 rDNA sequences. Zoologica Scripta 34 (6): 549-557. https://doi.org/10.1111/j.1463-6409.2005.00211.x
- Andjus S., Nikolic N., Dobricic V., Marjanovic A., Gacic Z., Brankovic G., Rakovic M. & Paunovic M. 2017. Contribution to the knowledge on the distribution of freshwater sponges - the Danube and Sava rivers case study. Journal of Limnology 77 (2): 199-208. https://doi.org/10.4081/jlimnol.2017.1677
- Arndt W. 1932. Die Susswasserschwammfauna Schwedens, Finnlands und Danemarks. Arkiv for Zoologi 24A (3): 1-33.
- Avise J.C., Arnold J., Ball R.M., Bermingham E., Lamb T., Neigel J.E., Reeb C.A. & Saunders N.C. 1987. Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Annual Review of Ecology and Systematics 18 (1): 489-522. https://doi.org/10.1146/annurev.es.18.110187.002421
- Becking L.E., Erpenbeck D., Peijnenburg K.T.C.A. & de Voogd N.J. 2013. Phylogeography of the sponge Suberites diversicolor in Indonesia: insights into the evolution of marine lake populations. PLoS ONE 8 (10): e75996. https://doi.org/10.1371/journal.pone.0075996
- Boury-Esnault N. & Rutzler K. 1997. Thesaurus of sponge morphology. Smithsonian Contributions to Zoology 596: 1-55. https://doi.org/10.5479/si.00810282.596
- Burland T.G. 1999. DNASTAR's Lasergene Sequence Analysis Software. In: Misener S. & Krawetz S.A. (eds) Bioinformatics Methods and Protocols: 71-91. Methods in Molecular Biology 132, Humana Press, Totowa, NJ. https://doi.org/10.1385/1-59259-192-2:71
- Chenuil A., Hoareau T.B., Egea E., Penant G., Rocher C., Aurelle D., Mokhtar-Jamai K., Bishop J.D.D., Boissin E., Diaz A., Krakau M., Luttikhuizen P.C., Patti F.P., Blavet N. & Mousset S. 2010. An efficient method to find potentially universal population genetic markers, applied to metazoans. BMC Evolutionary Biology 10 (1): e276. https://doi.org/10.1186/1471-2148-10-276
- Davey J.W. & Blaxter M.L. 2010. RADSeq: next-generation population genetics.Briefings in Functional Genomics 9 (5-6): 416-423. https://doi.org/10.1093/bfgp/elq031
- de Voogd N.J., Alvarez B., Boury-Esnault N., Carballo J.L., Cardenas P., Diaz M.C., Dohrmann M., Downey R.V., Hajdu E., Hooper J.N.A., Kelly M., Klautau M., Manconi R., Morrow C.C., Pisera A.B., Rios P., Rutzler K., Schonberg C.H.L., Vacelet J. & Soest R.V. undated. World Porifera Database. Available from http://marinespecies.org/porifera [accessed 10 Feb. 2021]. https://doi.org/10.14284/359
- Dice L.R. 1945. Measures of the amount of ecologic association between species. Ecology 26 (3): 297-302. https://doi.org/10.2307/1932409
- Droscher I. & Waringer J. 2007. Abundance and microhabitats of freshwater sponges (Spongillidae) in a Danubean floodplain in Austria. Freshwater Biology 52 (6): 998-1008. https://doi.org/10.1111/j.1365-2427.2007.01747.x
- Duran S., Giribet G. & Turon X. 2004. Phylogeographical history of the sponge Crambe crambe (Porifera, Poecilosclerida):range expansion and recent invasion of the Macaronesian islands from the Mediterranean Sea. Molecular Ecology 13 (1): 109-122. https://doi.org/10.1046/j.1365-294X.2003.02022.x
- Edgar R.C. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32 (5): 1792-1797. https://doi.org/10.1093/nar/gkh340
- Eklund A. 2010. Sveriges vattendrag. SMHI Faktablad 44.
- Evans K.L. & Montagnes D.J.S. 2019. Freshwater sponge (Porifera: Spongillidae) distribution across a landscape: environmental tolerances, habitats, and morphological variation. Invertebrate Biology 138 (3): e440. https://doi.org/10.1111/ivb.12258
- Excoffier L., Laval G. & Schneider S. 2005. Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1 (1): e47. https://doi.org/10.1177/117693430500100003
- Folkers M. & Rombouts T. 2019. Sponges revealed: a synthesis of their overlooked ecological function within aquatic ecosystems. In: Jungblut S., Liebich V. & Bode-Dalby M. (eds) YOUMARES 9 - The Oceans Our Research, Our Future: 181-193. Springer, Cham, Switzerland. https://doi.org/10.1007/978-3-030-20389-4_9
- Folmer O., Black M., Hoeh W., Lutz R. & Vrijenhoek R. 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology 3 (5): 294-299.
- Frost T.M., De Nagy G.S. & Gilbert J.J. 1982. Population dynamics and standing biomass of the freshwater sponge Spongilla lacustris. Ecology 63 (5): 1203-1210. https://doi.org/10.2307/1938844
- Gerard K., Guilloton E., Arnaud-Haond S., Aurelle D., Bastrop R., Chevaldonne P., Derycke S., Hanel R., Lapegue S., Lejeusne C., Mousset S., Ramsak A., Remerie T., Viard F., Feral J.P. & Chenuil A. 2013. PCR survey of 50 introns in animals: cross-amplification of homologous EPIC loci in eight nonbilaterian, protostome and deuterostome phyla. Marine Genomics 12 (C): 1-8. https://doi.org/10.1016/j.margen.2013.10.001
- Hakanson L. 1994. How many lakes are there in Sweden? Geografiska Annaler: Series A, Physical Geography 76 (3): 203-205. https://doi.org/10.1080/04353676.1994.11880418
- Hasegawa M., Kishino H. & Yano T. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution 22 (2): 160-174. https://doi.org/10.1007/BF02101694
- Huson D.H. & Bryant D. 2006.Application of phylogenetic networks in evolutionary studies. Molecular Biology and Evolution 23 (2): 254-267. https://doi.org/10.1093/molbev/msj030
- Larsson A. 2014. AliView: a fast and lightweight alignment viewer and editor for large datasets. Bioinformatics 30 (22): 3276-3278. https://doi.org/10.1093/bioinformatics/btu531
- Leidy J. 1851. On Spongilla. Proceedings of the Academy of Natural Sciences of Philadelphia 5: 278.
- Leigh J.W. & Bryant D. 2015. POPART: full-feature software for haplotype network construction. Methods in Ecology and Evolution 6 (9): 1110-1116. https://doi.org/10.1111/2041-210X.12410 Lieberkuhn N. 1856. Zusatze zur Entwicklungsgeschichte der Spongillen. Archiv fur Anatomie, Physiologie und Wissenschaftliche Medicin 1856: 496-514.
- Linnaeus C. 1759. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis. Editio decima, reformata. Vol. 2. Laurentii Salvii, Stockholm [Holmiae]. https://doi.org/10.5962/bhl.title.542
- Lopp A., Reintamm T., Vallmann K., Pari M., Mikli V., Richelle-Maurer E. & Kelve M. 2007. Molecular identification, characterization and distribution of freshwater sponges (Porifera: Spongillidae) in Estonia. Fundamental and Applied Limnology / Archiv fur Hydrobiologie 168 (1): 93-103. https://doi.org/10.1127/1863-9135/2007/0168-0093
- Lucentini L., Gigliarelli L., Puletti M.E., Palomba A., Caldelli A., Fontaneto D. & Panara F. 2013. Spatially explicit genetic structure in the freshwater sponge Ephydatia fluviatilis (Linnaeus, 1759) within the framework of the monopolisation hypothesis. Journal of Limnology 72 (1): e14. https://doi.org/10.4081/jlimnol.2013.e14
- Madden T. 2013. Chapter 16. The BLAST sequence analysis tool. In: The NCBI Handbook, 2nd Ed.: 1-15. National Center for Biotechnology Information (NCBI), Bethesda, MD. Available from https://www.ncbi.nlm.nih.gov/books/NBK153387/ [accessed 7 Jun. 2022].
- Manconi R. & Pronzato R. 2007. Gemmules as a key structure for the adaptive radiation of freshwater sponges: a morpho-functional and biogeographical study.In: Custodio M.R., Lobo-Hajdu G., Hajdu E. & Muricy G. (eds) Porifera Research: Biodiversity, Innovation and Sustainability. Proceedings of the 7th International Sponge Symposium: 61-77. Museu Nacional, Rio de Janeiro.
- Manconi R. & Pronzato R. 2008. Global diversity of sponges (Porifera: Spongillina) in freshwater. Hydrobiologia 595 (1): 27-33. https://doi.org/10.1007/s10750-007-9000-x
- Manconi R. & Pronzato R. 2016. How to survive and persist in temporary freshwater? Adaptive traits of sponges (Porifera: Spongillida): a review. Hydrobiologia 782 (1): 11-22. https://doi.org/10.1007/s10750-016-2714-x
- McCormack G. & Kelly M. 2002. New indications of the phylogenetic affinity of Spongosorites suberitoides Diaz et al., 1993 (Porifera, Demospongiae) as revealed by 28S ribosomal DNA. Journal of Natural History 36 (9): 1009-1021. https://doi.org/10.1080/00222930110040394
- Morrow C.C., Picton B.E., Erpenbeck D., Boury-Esnault N., Maggs C.A. & Allcock A.L. 2011. Congruence between nuclear and mitochondrial genes in Demospongiae: a new hypothesis for relationships within the G4 clade (Porifera: Demospongiae). Molecular Phylogenetics and Evolution 62 (1): 174-190. https://doi.org/10.1016/j.ympev.2011.09.016
- Nichols S. & Barnes P. 2005. A molecular phylogeny and historical biogeography of the marine sponge genus Placospongia (Phylum Porifera) indicate low dispersal capabilities and widespread crypsis. Journal of Experimental Marine Biology and Ecology 323 (1): 1-15. https://doi.org/10.1016/j.jembe.2005.02.012
- Okland K.A. & Okland J. 1996. Freshwater sponges (Porifera: Spongillidae) of Norway: distribution and ecology. Hydrobiologia 330 (1): 1-30. https://doi.org/10.1007/BF00020819
- Pasnin O., Voigt O., Worheide G., Rincon A.P.M. & Heyden S. von der. 2020. Indo-Pacific phylogeography of the lemon sponge Leucetta chagosensis. Diversity 12 (12): 466. https://doi.org/10.3390/d12120466
- Penney J.T. & Racek A. 1968. Comprehensive revision of a worldwide collection of freshwater sponges (Porifera, Spongillidae). Bulletin of the United States National Museum 272: 1-184. https://doi.org/10.5479/si.03629236.272.1
- Pronzato R. & Manconi R. 2001. Atlas of European freshwater sponges. Annali del Museo civico di Storia naturale di Ferrara 4: 3-64.
- QGIS Development Team 2016. QGIS Geographic Information System. Available from https://www.qgis.org/en/site/ [accessed 7 Jun. 2022].
- Ricciardi A. 2015. Chapter 5 - Ecology of invasive alien invertebrates. In: Thorp J.H. & Rogers D.C. (eds) Thorp and Covich's Freshwater Invertebrates 4th Ed.: 83-91. Elsevier. https://doi.org/10.1016/B978-0-12-385026-3.00005-X
- Richelle E., Degoudenne Y., Dejonghe L. & van de Vyer G. 1995. Experimental and field studies on the effect of selected heavy metals on three freshwater sponge species: Ephydatia fluviatilis, Ephydatia muelleri and Spongilla lacustris. Archiv fur Hydrobiologie 135 (2): 209-231. https://doi.org/10.1127/archiv-hydrobiol/135/1995/209
- Richelle-Maurer E., Degoudenne Y., van de Vyer G. & Dejonghe L. 1994. Some aspects of the ecology of Belgian freshwater sponges. In: van Soest R.W.M., van Kempen T.M.G. & Braekman J.-C. (eds) Sponges in Time and Space: 341-350. A.A. Balkema, Rotterdam.
- SCB undated. Marken i Sverige. Available from https://www.scb.se/hitta-statistik/sverige-i-siffror/miljo/marken-i-sverige/ [accessed 10 Feb. 2021].
- Schroder H.C., Efremova S.M., Itskovich V.B., Belikov S., Masuda Y., Krasko A., Muller I.M. & Muller W.E.G. 2003. Molecular phylogeny of the freshwater sponges in Lake Baikal. Journal of Zoological Systematics and Evolutionary Research 41 (2): 80-86. https://doi.org/10.1046/j.1439-0469.2003.00199.x
- SLU Artdatabanken undated. Dyntaxa.Available from https://www.dyntaxa.se/ [accessed 10 Feb. 2021].
- Sorensen T. 1948. A method of establishing groups of equal amplitude in plant sociology based on similarity of species and its application to analyses of the vegetation on Danish commons. Kongelige Danske Videnskabernes Selskab 5 (4): 1-34.
- Swierts T., Peijnenburg K.T.C.A., Leeuw C.A., Breeuwer J.A.J., Cleary D.F.R. & Voogd N.J. 2017. Globally intertwined evolutionary history of giant barrel sponges. Coral Reefs 36 (3): 933-945. https://doi.org/10.1007/s00338-017-1585-6
- Swofford D.L. 2003. PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Sinauer Associates, Sunderland, MA.
- Tendal O.S. 1967a. On the freshwater sponges of Denmark. Videnskabelige Meddelelser fra Dansk naturhistorisk Forening i KJObenhavn 130: 173-178.
- Tendal O.S. 1967b. Ferskvandsvampe (Spongillidae) i Thy. Flora og Fauna 73 (2): 63-67.
- Troia A. 2016. Dispersal and colonization in heterosporous lycophytes: palynological and biogeographical notes on the genus Isoetes in the Mediterranean region. Webbia 71 (2): 277-281. https://doi.org/10.1080/00837792.2016.1191171
- Westman Y., Olsson H., Pettersson O., Wingqvist E.-M. & Bjorkert D. 2017. Arbete med SVAR version 2016, Svenskt Vattenarkiv, en databas vid SMHI: 1-55. SMHI (Swedish Meterological and Hydrological Institute), Norrkoping, Sweden.
- Williams J.G.K., Kubelik A.R., Livak K.J., Rafalski J.A. & Tingey S.V. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Research 18 (22): 6531- 6535. https://doi.org/10.1093/nar/18.22.6531
- Winnepenninckx B., Backeljau T. & de Wachter R. 1993. Extraction of high molecular weight DNA from molluscs. Trends in Genetics 9 (12): 407. https://doi.org/10.1016/0168-9525(93)90102-N Worheide G., Hooper J.N.A. & Degnan B. 2002. Phylogeography of western Pacific Leucetta 'chagosensis ' (Porifera: Calcarea) from ribosomal DNA sequences: implications for population history and conservation of the Great Barrier Reef World Heritage Area (Australia). Molecular Ecology 11 (9): 1753-1768. https://doi.org/10.1046/j.1365-294X.2002.01570.x