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Published July 13, 2022 | Version 1.0.4
Dataset Open

Datasets associated with the publication of the "satuRn" R package

  • 1. Ghent University
  • 2. University of Copenhagen

Description

On this Zenodo link, we share the data that is required to reproduce all the analyses from our publication "satuRn: Scalable Analysis of differential Transcript Usage for bulk and single-cell RNA-sequencing applications".

This repository includes input transcript-level expression matrices and metadata for all datasets, as well as intermediate results and final outputs of the respective DTU analyses. For a more elaborate description of the data, we refer to the companion GitHub for our publications; https://github.com/statOmics/satuRnPaper. Note that this is version 1.0.3 of the data (uploaded on 2022-07-08). If any changes were to be made to the datasets in the future, this will also be communicated on our companion GitHub page. 

Files

Case_study.zip

Files (15.8 GB)

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Additional details

Related works

Is supplement to
Journal article: https://f1000research.com/articles/10-374/v2 (URL)