Published July 21, 2025 | Version v0.11.0
Software Open

AUCMEDI: a framework for Automated Classification of Medical Images

Description

:sparkles: New Features

  • ba8d051 - utils: added visualizer for volumes and heatmap visualization support for 3D (commit by @muellerdo)
  • 538a015 - DataGenerator: added boolean switch for resize to preprocess_image() (commit by @muellerdo)
  • c376527 - XAI: added 3D support for the XAI decoder (commit by @muellerdo)
  • 06b9c8b - XAI: added 3D support for the Grad-CAM (commit by @muellerdo)
  • 6f86a0a - XAI: added overlay option to XAI heatmap visualization (commit by @muellerdo)
  • 370830c - XAI: add 3D support for Guided Backpropagation with unit tests for RGB and HU volumes
  • 48db4a2 - XAI: add 3D support for Saliency Maps with unit tests for RGB and HU volumes

:bug: Bug Fixes

  • 0455791 - replace deprecated layer.output_shape with layer.output.shape
  • 2613b9e - add missing import for image_loader
  • cb5ae2a - gradcam: fix gradient model construction
  • 101bbdd - gradcam_pp: fix gradient model construction
  • 23c20d1 - XAI: add 3D support for Grad-CAM++
  • e580ab6 - XAI: return native image objects to avoid shape mismatch in decoder
  • 049b7ef - augmentation: corrected image padding and flip augmentation

:zap: Performance Improvements

  • 208c32e - XAI: adjusted alpha overlay for XAI heatmaps (commit by @muellerdo)

:recycle: Refactors

  • 27f59e2 - NeuralNetwork: remove unused batch_queue_size parameter

:white_check_mark: Tests

  • a315d40 - XAI: removed standardization from datagenerator for XAI unittesting (commit by @muellerdo)
  • e753eb0 - Visualizer: added unittesting for visualizer utils (commit by @muellerdo)
  • d216c43 - XAI: add 3D unit tests for Grad-Cam and Grad-Cam++ with RGB and HU volumes
  • 27d8de2 - XAI: add 3D unit tests for Guided Grad-CAM with RGB and HU volumes

:construction_worker: Build System

  • 5767a3a - updated to version 0.11.0 (commit by @muellerdo)
  • e28e810 - updated actions for PyPI release (commit by @muellerdo)

Notes

If you use this software, please cite it as below.

Files

frankkramer-lab/aucmedi-v0.11.0.zip

Files (30.0 MB)

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Additional details

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