Published March 21, 2022
| Version v0.99.3
Software
Open
dzhang32/ggtranscript:
Description
The goal of ggtranscript is the simplify the process of visualizing transcript structure and annotation. To achieve this, ggtranscript introduces 5 new geoms (geom_range(), geom_half_range(), geom_intron(), geom_junction() and geom_junction_label_repel()) as well as several helper functions. As a ggplot2 extension, ggtranscript inherits ggplot2's familiarity and flexibility, enabling users to intuitively adjust aesthetics, parameters, scales etc as well as complement ggtranscript geoms with existing ggplot2 geoms to create informative, publication-ready plots.
Notes
This research was funded in whole or in part by Aligning Science Across Parkinson's [Grant numbers: ASAP-000478 and ASAP-000509] through the Michael J. Fox Foundation for Parkinson's Research (MJFF). For the purpose of open access, the author has applied a CC BY public copyright licence to all Author Accepted Manuscripts arising from this submission.
E.K.G. was also supported by the Postdoctoral Fellowship Program in Alzheimer's Disease Research from the BrightFocus Foundation (Award Number: A2021009F). M.R. was supported through the award of a Tenure Track Clinician Scientist Fellowship (MR/N008324/1).
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dzhang32/ggtranscript-v0.99.3.zip
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Additional details
Related works
- Is supplement to
- https://github.com/dzhang32/ggtranscript/tree/v0.99.3 (URL)