Published March 7, 2022 | Version v1
Dataset Open

MD simulation of POPC bilayer with CHARMM36 force field. 10 w/l.

Description

MD simulation of POPC (1-palmitoyl-2-oleoyl-phosphatidylcholine) bilayer with CHARMM36 force field. 10 w/l.

Dataset contains simulation files including trajectories (.xtc) (original production.xtc, and equilibrated and centered centered-75-500ns.xtc).

System: POPC bilayer in water

Number of lipids: 200 (100/leaflet)

Number of waters: 2000

Simulation time: 500 ns

Sampling rate: every 10 ps

Simulation engine: GROMACS 2019.5

Temperature: 300 K

Files

Files (11.9 GB)

Name Size Download all
md5:99f9c1b218789d12b3e65e194b2f2da0
5.2 GB Download
md5:6943cdf3ae3c7b5a3a99c9e54d4a9b6e
24.0 kB Download
md5:441ade57746cc3fd828e465b89f467b1
38.6 kB Download
md5:a99af41b798d2cea33711e96c129bd02
156.0 MB Download
md5:05f132f57d45d300ee092612a7c54eb5
2.3 MB Download
md5:1d63fedeb556c6b8b53e3caf6c08bd07
831.3 kB Download
md5:4cee8fec635962cd3fe2ff2a212e3fd1
394.4 MB Download
md5:727e43ee63c8073ff60802c1cf1792e1
6.2 GB Download
md5:c6d9e708d0b3d06eb010f4cfedab9a55
1.2 kB Download
md5:e163a90c2d069565f80d1c2b4857d4ce
648 Bytes Download
md5:f955eefb5c1a06b646829ff789a817f3
364 Bytes Download

Additional details

Related works

Compiles
Preprint: 10.26434/chemrxiv-2022-m89bg (DOI)