Published March 1, 2024 | Version 2.0
Software Open

GarmanGroup/RABDAM: Version 2.0

Creators

Description

RABDAM version 2:

  • Calculates Bnet-percentile values.
  • Introduces the filter flag to allow users to check their input models meet the requirements for Bnet and Bnet-percentile calculation set out in Shelley & Garman, 2022.
  • Switches over from using PDBCUR to using cctbx to generate a copy of the unit cell. Due to small rounding differences in the xyz coordinates output by the two programs, occasionally this affects the BDamage packing density calculation, and so for some models there are slight differences in the Bnet values output from RABDAM version 2 as compared to RABDAM version 1.

Files

GarmanGroup/RABDAM-2.0.zip

Files (1.5 MB)

Name Size Download all
md5:1843bcedfcd689f3710160a05de15b97
1.5 MB Preview Download

Additional details

Related works

Is supplement to
Software: https://github.com/GarmanGroup/RABDAM/tree/2.0 (URL)