There is a newer version of the record available.

Published January 17, 2022 | Version 0.0.1
Dataset Open

SWAM model from GTEx dataset

Authors/Creators

  • 1. University of Michigan

Description

The SWAM models for each GTEx tissue are publicly available at doi:10.5281/zenodo.5866313. These models are trained from GTEx PrediXcan models across all tissues, targeting each tissue type, and formatted in a format that can be directly used by the PrediXcan software tool. See https://github.com/aeyliu/SWAM and https://github.com/aeyliu/SWAM-manuscript for the detailed code to reproduce these resources. More comprehensive information will be available when this resource is linked with a peer-reviewed publication.

Files

Files (6.3 GB)

Name Size Download all
md5:7a1463df255f59d06392af1dde54e0fa
6.3 GB Download
md5:34afc47c6a6fd00c75a72ab2dc5a7aa5
1.6 kB Download

Additional details

References

  • Liu A, Kang HM. Meta-imputation of transcriptome from genotypes across multiple datasets using summary-level data. bioRxiv. 2021 Jan 1.